Detail



ID : Ahg487117

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487117|fgenesh2_kg.6__251__AT5G03420.1
Sequence
ATGGCGACGA TTTCTCAGAG ACCTTTCTCT CTCTCCTTCC CTTCTCTCGA ATTTCGGAAA CCATTGTTAT ACTATCATCG CCATCATCAA CCTCAACTTT TTGTTTCGTA CTTGAATTAC ACGAAGAAGA AGCGTAGTTT TGTCTGTTTC GCTTGTTCCA TCAAACAAAC CAGAGTTCGT AAGAGAGTGA AGAGCGATGA GGAGCTTCGG AGTGAGATTA TGGAGTTCGT TGCTTTAGCT GGGCTTCCTC AAGGTCACGT GCCGTCCATG AAGGAACTCT CGGCACATGG AAGAGTTGAT CTTGCCAACA TTGTCAGACG AAGAGGATAT AAATTTATCA AGGGACTTGT TGCAAACTCG GATATGGATG ACTGTAACGA GCTAGTCTCT GAGAATAATA CCAACACTGA AACAGGTGCA AGTGGAGTTT GTTTGGAAGA TTTTCTCTCC ACTTTTCTGA TATATTTATC TGGTGTAGAA GGTCAGGGCG AAGAAGCACT GGATGTTGTT GACGGAAACT TTTCTACTGA ACTACCTTCG AGCCATTCAA GTAACGAGGC TGAAGAACAA GGAAGTTTGA GTAAAGATGA ATTTATATCC TCTTCGTCTG ACGATGGATT TTTGAGCTTG GAAAACTCCC TTTCTAACTT GGGTGACAGT AATCATTCAG GAGAAATCAC AGAAAACAAT TTTAAGGTTG AGAGCGTGGA GCTCAATGAG AGAGCTGACA TTGAAAACTC TTCTTCGGAA GCTTCAATAT CTGCAAACTA TTCTCAAGTT GTAGATGATA CTTCAAGCCG TCCTACTGAC GCAGAAGCTG GCAATGTTTT GATGACAGAG GATGAGGAGG TCAATGATGT GGACAAAGAT TTCTCTCTTA CGTTTGATCA TTACACCAGT CCTACCTATA ATCATTACAC TAGTCCAGAT CTCAGTTACA CCAAACATGT TGACATTGCT ACTGGATCCT CGTATGATTT GACCTCGGAA AATACCATGG CAAATGCAGA GAATTTTCAG AATCAGCAGA TTGATGATAT GGCTGAAAAT CGTTCTGGTA GTGCTGATGA TAGTTTAGTT GAGTTTGAGG ATAAGGATTG GATGTCAGGA CTTTCTTCTT CCATTTCAAT CATAGAAGAA AAAACAACCA GATTTATACA GAATGGATAC TTGGATATAG TTGATGATGA TGAAAATGGC ATACCTAATG AAAGCTGTCC TGAAGACCCT AAGGAAGATG TAGAAACAAA CAAAGGTGGT GAGTACATAG GAGACAGTTA TGGTGGTCAG AGAAGTGTCA GTATGCCACT AAATGGAAGT GCCTTAGCAT TGGAGGAGGT TACCCATGCT AAAGAACTTA ACAGCTCTGA CAGGAATAGT GATCAGAGAG ATGGGAGTGC TGACCTGGAC TCGGATTCAC ATGATGAGAC CAGGAAACGG GAAAATCAGG TTGAAATTGA TCGGCTGAGG TTCATGCTGC ATCAAAAAGA GCTGGAGTTG TCAAGGCTGA AAGAGCAGAT TGAAAAGGAA AAGCTCTCTC TTTCAGTTCT CCAAAGACAG GCTGAAACAG AGATCCAAAA GGCCCAAATG CTTATCTCAG AGAAGGAAGT TGAATTGCGA GAAGCTGAGG AAAGTCTTTC AGGATTGCAA GAGGTTGTGA TTGAATATTG TGGAGATGGT AATGTTGTGG AAGTGACTGG TAGCTTCAAT GGGTGGCAAC ACCGAGTGGG AATGGAGCTA CAAGCATCCA AGTCAATCGG GAAACAGAAA TGCTGGTCGA CATTACTGTG GTTATATCCC GGTACATATG AGATTAAGTT CATCGTGGAC GGGCAATGGA TAACGGATCC TCAAAAAGAT TCGGTTACAA GAGGGCACAT CACAAACAAC ATTCTCATAG TAGACAGCTG ATGATCTCTT GCTTTTACTG ATTTTTCGAG TCGAATTCAC TCCAGATAAT CGGTGCAGGC TTAAACAGGG GAAAAGGAGC AGAGTAAATC ATTTCAAAGT TTTATTTTAG CCTCTTCAAT TATTTCAAAT CTAGGATGTT TTGCTTTCAT TCTTTAAGGC TTAGGGATAG ACTCTGTACA AAATTGTAAT TTAAGGTAAA ATAATACATT TATAAGG 
Length2127
Protein Sequence
Protein Residue
Map Locationscaffold_6: 939414.. 942939
Download Sequence
A.thaliana
AGI-codeAT5G03420.1
Description5'-AMP-activated protein kinase-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.2111 Ahg354992 Pentatricopeptide repeat (PPR) superfamily protein
9.48683 Ahg496010 FTSH protease 9
10.247 Ahg318821
10.2956 Ahg480728 pyrophosphorylase 2
10.3923 Ahg926901 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
17.4642 Ahg478365 P-loop containing nucleoside triphosphate hydrolases superfamily protein
28.3901 Ahg481532 Plant haem oxygenase (decyclizing) family protein
32.6343 Ahg484528
39.7995 Ahg356151 DNA/RNA polymerases superfamily protein
40.8901 Ahg487713 Regulator of chromosome condensation (RCC1) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression