Detail



ID : Ahg481803

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481803|fgenesh2_kg.4__863__AT2G28880.1
Sequence
TTTCTCTTCC TCCTTCTCTT CACCATTGAT TCCTCTCAGA GCAAAAAGCT TCTTCCATTT TCTTCTTCAT ACGATTCGTT GCTTTTGAAT CTCCATCACT TGGTTTCGTT TCTAAACGTA AGTCATGAAC ATGTATTTTT CGTTTTGTTC AACTTCTTCT GAGCTTTCAT ATCCAAGTGA AAATGTTCTG AGATTTTCGG TTGCGAGGCG GTTGTTCTCT CCTAAATGGA AGAATGGTTT CATTAGTTTA CCTCATCGTG GTACGAGGAA GGTTCTTGCG GCAAGCCGTT TTGTGCCAGG GAAATTGGAA GATTCGGCGG TTGTTAAGAA GAGTTTACCG ATAAGAGAAC CTGTAGAGAG GATTGGTGTT GTGAGGACTT TGTTGATTGA TAATTATGAT AGTTATACAT TCAATATATA TCAGGCACTG AGTACTATTA ATGGAGTGCC TCCTGTGGTT ATTCGAAATG ATGAGTGGAC GTGGGAAGAA GCTTACCATT ACTTATATGA AGATGTTGCT TTCGATAATA TTGTCATATC GCCCGGACCT GGTTCGCCGA TGTGTCCAGC TGATATAGGA ATATGTCTTC GTCTTTTGCT TGAATGTCGT GATATTCCAA TTCTAGGCGT CTGCCTTGGC CACCAGGCAC TGGGTTATGT CCATGGAGCT CATGTGGTGC ATGCCCCGGA ACCAGTCCAT GGACGGTTGA GTGGGATTGA ACATGATGGG AACATACTGT TTTCTGATAT TCCATCTGGG AGAAACTCTG ATTTCAAGGT TGTTAGATAC CATTCGCTGA TCATAGATAA GGAATCACTA CCAAAGGAAC TTGTACCAAT AGCGTGGACG ATTTATGATG ACACTGGCTC TTTCTCTGAG AAGAAGTTGT GTGTTCCTGT GAAGAACACT GGGAGCCCAC TGAATGGATC TGTCATTCCT GTTTCAGAAA AGTTGGAAAA TGGAAGCCAT TGGCCTTCGT CCCATGTTGA TGAGAAACAA GATAGACACA TTCTCATGGG CATCATGCAT TCTTCTTTTC CCCATTATGG TTTACAGTTT CATCCAGAGA GTATTGCTAC TACCTATGGT AGTCAGTTAT TTAAAAATTT CAAAGATATA ACTGTGGATT ACTGGAGTCG GTGCAAATCT ACATCCCTGC GTCGAAGAAA CATAAATGAC ACTGCAAACA TGCAGGTGCC TGGTGCTACT CAATTGCTGA AAGAACTTTC CAGAACTAGA TTTACAGGAA ATGGTTCTAG CTATTATGGG AACACTAAGA AGTCTCTGTT TGCTGCCAAG ACAAATGGTG TAGACGTCTT CGATCTGGCG GATTTATCAT ATCCAAAACC TCATGCAAAA TTGCTGAGGT TGAAATGGAA GAAGCATGAA CGTCTTGCAC ATAAAGTTGG TGGAGCAAAA AATGTATTCA TGGAACTCTT TGGCAAGAAT AAAGGGAATG ATACGTTTTG GCTGGATACT TCTTCTACTG ACAAGGCTAG AGGACGATTT TCTTTCATGG GCGGTAAAGG TGGATCTCTC TGGAAGCAAT TGACATTTAG TTTATCTGAT CAAAGCGAGG GTATATCAAA ACATGCGGGA CATCTTCTGA TTGAAGATTC TCAGAGTTCT ACTGAGAAAG GATTCTTGGA AGAAGGCTTT CTTGATTTTC TCCGTAAGGA GCTTTCATCT ATCTCTTATG ATGAGAAGGA CTTCGCAGGG TTGCCTTTTG ATTTTTGCGG TGGATACGTA GGTTGTATTG GGTATGATAT TAAAGTCGAA TGTGGAATGC CAATTAATCG TCACAAATCC AACGCTCCAG ATGCATGTTT CTTCTTTGCA GATAATGTTG TTGCCATTGA TCATCAACTT GATGATGTAT ATGTATTATC GCTTTACGAA GAGGGAACCG CAGAAACCTC TTTCCTGAAG GATACTGAAG AGAAGCTCAT TAGCCTGATG GGTTCGTCCA CAAGAAAGTT TGAGGATCAG ACTCTTCCAG TTATAGATTC ATCTCAATGC AAAACAAGTT TTGTTCCTGA CAAATCCCGA GAACAGTATA TAAACGATGT TCAGAGCTGT ATGAAGTATA TCAAAGACGG GGAAAGCTAC GAGCTTTGTC TCACTACTCA GAACAGAAGG AAAATAGGCA ATGCTGATCC TTTGGGACTT TATCTCCACC TGAGAGAGAG GAATCCAGCA CCATATGCAG CCTTTCTCAA CTTCTCAAAT GCAAATTTGT CTTTATGCTC TTCGTCCCCT GAAAGGTTTC TTAAGCTGGA CAGAAATGGA ATGCTAGAAG CAAAGCCGAT TAAGGGTACT ATAGCTCGTG GCTCCACGCC TGAAGAAGAT GAACTTCTTA AATTGCAATT GAAACTCAGT GAGAAGAATC AAGCCGAGAA TCTAATGATT GTCGACCTTC TACGGAATGA TCTCGGTCGT GTCTGTGAGC CAGGCTCAGT CCATGTACCT AACCTCATGG ACGTGGAATC ATACACAACA GTACACACTA TGGTGAGCAC GATCCGCGGA TTGAAAAAAC CAGATATTAG TCCAGTGGAG TGTGTAAGAG CAGCTTTCCC TGGCGGTTCA ATGACCGGTG CCCCAAAACT AAGATCCGTT GAGATTCTCG ATTCTCTAGA GAACTGTTCA AGAGGGCTTT ACTCTGGCTC AATCGGGTAT TTCTCGTATA ACGGTACATT TGATCTGAAC ATTGTTATAA GAACAGTAGT GATACATGAG GATGAAGCTT CCATTGGAGC AGGAGGAGCA ATAGTTGCAT TATCAAACCC AGAAGATGAG TTTGAGGAAA TGATTCTTAA GACTAAAGCT CCTGCTAATG CAGTTATGGA GTTTTGTAGT GATCAGAGGA GACAATAGTT TTGTTTCTTC AAAGTTTGGG TTTAAAACAG TTATCTTTTT TATAGAGAAA AGAGTGATTT ACCTCAAATT CAAAAACTAA TTGTTGTTGT AAGATTATTT TTTAAAGATA GTTATTTGAT TGATGTCTCT TTAATAAAAG ATAGTTTTT 
Length3029
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12486677.. 12491587
Download Sequence
A.thaliana
AGI-codeAT2G28880.1
Descriptionpara-aminobenzoate (PABA) synthase family protein
TAIR curator summary
Alias[ADCS][emb1997][aminodeoxychorismate synthase][embryo defective 1997]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg357183
31.1448 Ahg476021 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
32.6803 Ahg922878 SEUSS transcriptional co-regulator
39.9875 Ahg487697 transducin family protein / WD-40 repeat family protein
47.4342 Ahg496115 methyl-CPG-binding domain 7
52.4976 Ahg922683 ATP-dependent protease La (LON) domain protein
53.6843 Ahg937635 RNA-binding (RRM/RBD/RNP motifs) family protein
56.5774 Ahg914105 DNA/RNA polymerases superfamily protein
61.2536 Ahg933732 Thioredoxin superfamily protein
67.7348 Ahg951540 Disease resistance protein (CC-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression