Detail


ID : Ahg937635

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937635|scaffold_501826.1
Sequence
GTTCTCGGAG CAAGTTTTCC ATGACTGATA TTTTATCCTT CCACTTTTAC AGATTCGATT TCTTCAATGA TGTTGGAGAA GTTGTTAGTG TTCGACTTAT TGTAAACCCC GAGGGTAAGC ATGTGGGCTA TGGCTTTGTT GAGTTTGCTT CTCCTTGCTT AGCAAACATG GCGCTGGAAA AGAAGAATGG TGAATATTTG CACGATCATA AGATTTTTCT TGGTGTGGCT AAGACAGCTC CAGACCCTCC ACGACTTAAA GAAGCTTTGG TAATGGATTT AACTAGTTGC CTTTTGAGTT TGTTATGGAG AGCACATTGG GTGAAGTTTT TGATTTACAT GGAGAGATCA CAAGGGTTTT TGATGTTTCA GGTAGAAGAA GATGAGACAG TGGAAGGACT TGATGAAACT CCCAGTTGTG TTGAGGCAGT TGCCTTAAGA GAAAAGGTGC TCTTTGTTGC GCATCTTTCT CGCCAAACTA AAATATCACA TATCATCAAT TTCTTCAAAG ATGTTGGCCA AGTTGTTCAT GTCCGACTTA TTGTAGACCA AAAGGGCAAG CATGCTGGCC ATGGCTTTGT TGAGTTTACT TCTGCTGACG AAGCAAAGAA GGCGCTGGAA AAGAAGAATG GAGAATATTT ACACGATCGC GAGATTTATC TTGATTCGGT TAAGACAGCT CCATACCGTC CACGGCCCAA GTACGAAGAC TACCTTCGAC GAGAAAGCCG TCTGATAGAT GAAGATGAGG CAGTGGAAGG ACTTGATGAT GAAACTCCCG AGTTTGTTGA GGAAGTTGCC GTAAGAAAGA AGACGCTTTT CATTGCCAAT CTCTCTTTCA AAACTAAAAT ATCAGATATC GTCAATTTCT TCAAAGATGT TGGAGAAGTT TTTCGTGTTA GACTTATTGT AAACCACATG GGTGAGCATG TGGGCTGTGG CTTTGTTGAA TTTTCTTCTG CTAACGAAGC AAAGAAGGCG CTGCAAAAGA AGAATGGTGA AAAATTGCGC TTTCGGTATA TTTTTCTTGA CGAGGCTGAG ATAGCTCCAT ACCCTCTCCG ACCCAAGTAC GAAGAGTACC TTCTACGAGA TAGCCTTCTG ATAGAAGAAG ACGGTTTGGA GACCAACCCG AATCTGAAGA AACAGACGGG GAATTTTGCG GTAAGAAGAT TACTTTTTCT GACGACGATT GATAGAAGAA GATGATGCTA TTTGGTGTTT ATAACCTGT
Length1229
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13256800.. 13259470
Download Sequence
A.thaliana
AGI-codeAT5G41690.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg355810 RNA-binding (RRM/RBD/RNP motifs) family protein
2.82843 Ahg355852 RNA-binding (RRM/RBD/RNP motifs) family protein
12.8062 Ahg925981
16.7332 Ahg891097 RNA-binding (RRM/RBD/RNP motifs) family protein
22.9129 Ahg355983 RNA-binding (RRM/RBD/RNP motifs) family protein
25.4165 Ahg478984 Transcription factor TFIIIC, tau55-related protein
26.7395 Ahg947835 Restriction endonuclease, type II-like superfamily protein
32.8634 Ahg928861 Pentatricopeptide repeat (PPR) superfamily protein
37.081 Ahg906790 RNA-binding (RRM/RBD/RNP motifs) family protein
43.2666 Ahg475613 ribosomal protein S11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression