Detail



ID : Ahg481829

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481829|fgenesh2_kg.4__889__AT2G29110.1
Sequence
ATGTGGTCTG TATTTAGAGC AAGTGAAATT CTAAACTTTT TTTTCTTTGT GTTTGCTTGT GTGAGCGCCA TCATCGGACC AAGAAACTCT ATGCAAGCAG AGTTTATGAT CAGACTCGCC AACAAAACTC AAGTACCAAC CATCACATTC TCTGCAACAA GTCCTCTTTT AACATCCATT AAAAGCGATT ACTTCGTCCG AGCCACTATC GATGACTCAT ACCAGGTCAA AGCCATTGCA GCCATTTTTG AATCCTTCGG ATGGAGAAGT GTCGTCGCAA TTTATGTGGA CAACGAGTTA GGTGAAGGAA TCATGCCTTA CTTGTTTGAC GCTTTACAAG ACGTGCAAGT CGATAGAAGT GTGATCTCCC CGGAGGCTAA CGATGACCAG ATTCTAAAAG AACTTTATAA GCTCATGACG AGGCAGACTA GGGTTTTCGT TGTCCACATG GCCTCACGTC TTGCTTCACG GATTTTTGAG AAAGCTAAAG AGATCGGGAT GATGGAGGAA GGGTATGTAT GGTTAATGAC CAATGGAATG ACGCATATGA TGAGACATAT CAACCATGGT CGTAGCTTAA ATAATATAGA GGGCGTGTTA GGTGTGAGGA GCCATGTCCC CCAATCGAAA GAGCTCAAAG ATTTCGGCTT GCGATGGAAT AAAAAGTTCG AAAAGGAGAA TCCAACGATG AGAGATGATC TAACCATTTT TGGATTACGG GCGTATGATT CAACCACTGC ATTGGCCATG GCCGTGGAGA AAACCAACAT AAGAAGCTTT CCGTATGATA ATGCGAGTGC GTCGTCAAAT AACATGACAG ATTTGGGGAA CCTAGGTGTC TCTCGCTACG GTCAAAGTCT TTTAAATGCT CTCTCGGAAA TAAGATTCAA TGGTTTGGCA GGAGAGTTTA AACTCATAGA CAAGCAGCTC GAGTCACCAA AGTTTGAGAT CATAAATTTT GTAGGAAATG AAGAGAGGAT TATCGGATTT TGGACACCGA GCAATGGACT TGTGAATGCA AATTCAAACA AAACAACTTC ATTTACAGGG GAGAGGTTTG GTCCATTGAT ATGGCCAGGG AAGTCGACTA TTGTTCCTAA AGGATGGGAG ATACCAACTA ATGGTAAGAA GATCAAAGTC GGTGTTCCTG TAAAGAAAGG CTTCTTCAAT TTTGTGGAAG TAATCACAGA TCCTATTACT AACATAACAA CTCCAAAGGG TTACGCCATA GACATCTTTG AAGCTGCTCT TAAGAAGTTG CCATATTCAG TCATTCCACA ATACTACCCA ACTTTGGATG CAGTTGTTGG AGATGTAACT ATCACAGCGT ACAGGTCTTT GTATGCTGAC TTCACGTTAC CATACACAGA GTCAGGAGTG TCTATGATGG TGCCGGTGAG AGACAATGAG AATAAGAACA CATGGGTGTT CCTCAAACCT TGGACCTTAG AATTATGGGT CACCACTGGT TGTTTCTTCG TCCTCATTGG TTTTGTTGTG TGGTTGTTCG AACATAGAGT CAACACAGAC TTCCGTGGAC CGCCTCACCA CCAGATCGGC ACTAGTTTTT GGTTCTCTTT CTCCACCATG GTTTTTGCCC ACCGTGAGAA GGTAGTGAGC AATTTAGCAA GGTTTGTGGT GATTGTGTGG TGCTTTGTGG TGCTTGTGCT CACTCAAAGC TACACAGCAA ATCTCACCTC TTTCTTGACG GTACAGCGTT CTCAACCAGG GGCCACAACT ATGAAAGATC TCATAAAAAA TGGCGAAAAA CGATGTCCCA TTGTTGTTAC TTCTCCAATG TTCATGTCAT TGTTGTTCTC ATCCGTTCAT CCCTTATGGC AATATTCCGG GAGAAATCTT CGAATTGAAG CATTCATCAA AGATGAATTC AAGTCCGAAC AACATCACTG GCAAAATCAT GGGTCGAAAG CTATGAAGAT TCAAAATCAG GTTGAAGAAG AAGAAAACGG CTCAGTTACG GGCTACCAAC ACGGGGCTTT TGTTAAAGAT ATTCTAAGAA ATGAGGGATT TAATGATTCT CAGCTCAAGC CTTTTGGTTC TTCCGAAGAA TGCGACGCAC TTTTGTCCAA TGGCAGTATT TCAGTAGCTT TCGACGAAAT TGCCTACCTT AAGGCTATCC TTTCTCAATA CTGCTCCAAA TATGCCATGG TTGAACCTAC ATTTAAGACT GCTGGTTTTG GCTTTGCATT CCCCAAGAAT TCTCCTTTGA CAGGAGATGT CTCAAGGGCT ATCTTAAATG TGACTCAAGG AGATGAATGC GACACATCGA GAACAAATGG TTCATGA 
Length2307
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12692338.. 12697044
Download Sequence
A.thaliana
AGI-codeAT2G29110.1
Descriptionglutamate receptor 2.8
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.8][GLR2.8][GLR2.8][glutamate receptor 2.8]
Gene coexpression
MR
MR Locus Description
7.54983 Ahg915669 Glutathione S-transferase family protein
15.6205 Ahg483400 NAC domain containing protein 42
16.6132 Ahg482026 OSBP(oxysterol binding protein)-related protein 1A
16.9706 Ahg907304 S-locus lectin protein kinase family protein
18.3303 Ahg483895 myb domain protein 2
19.3391 Ahg909878
20.347 Ahg475116 WRKY family transcription factor
20.3715 Ahg332020 cytochrome P450, family 81, subfamily F, polypeptide 2
21.9317 Ahg908865 Protein kinase superfamily protein
22.3159 Ahg476076 NAC-like, activated by AP3/PI
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression