Detail



ID : Ahg482526

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482526|fgenesh2_kg.4__1586__AT2G35650.1
Sequence
AAATATCCAG TTGACTCCAA AAAGACTAGA GACCAGAGAT TATCGACCAC GAAGCAGCAG ACGATTCGTG GAAGAGACTT GGAGAGATAT TTCCCAATGT CTCCTCTCCC AATCTTCCAT CGTCTTCCTC ACGCCACGTT CTCTTCCTTT CTCCTCTCAC TGTCTCAAGT TGGAAGTTCT AAAACATCAG TGGCATTCCT CAATGCCTTC AAATCGGACG ATATCATTGC TCGAATTGGA CTATGGTGGC AGCTAATAAG GGCTGTTGTA CTTGTACCTG TCTTCAAGTT CCTGGTGGCT CTATGTTTGG TCATGTCTGT CATGTTCTTC GTAGAGGTTA TGTACATGGG AATCGTCGTT TTGTATGTCA AGTTGTTCAA GAGAAAACCA GAGAAAATTT ACAAATGGGA GCCTATGGAG GATGATGTTG AGTGTGGCAG TGCAAGCTAC CCTATGGTTC TTGTGCAAAT TCCTATGTAC AATGAAAAAG AGGTTTGTGA GCAATCAATT GCAGCTGCTT GTAAAGTTTC ATGGCCATCG AATCGTATAA TAATTCAAGT GCTTGATGAT TCCACGGATC CAGCCAGTAA GGAATTGGTG AAAAGGGAGT GTGATAGATG GTCGAAAGAA GGTGTCAACA TAACGTTTGA GATAAGGGAC AACAGGAACG GATACAAAGC TGGTGCGCTG AGAGAAGGAA TGAAGCATAG CTATGTGAAG CAGTGTGACT ATGTTGCTAT CTTTGATGCT GATTTCCAGC CTGATCCTGA CTTCCTCCAC CGCACTGTTC CTTTCTTAAT TCACAATCCC AAGTTAGCAC TTGTACAAGG CCGGTGGGAG TTTGTGAACG CGGGTCAATG CATGATGACG AGATTACAGG AGATGTCTCT GAGTTACCAC TTTACAATAG AGCAGCAAGT TGGATCTTCA ACATTTGCCT TCTTTGGGTT CAACGGAACT GCTGGCGTCT GGAGAATCTC AGCATTGAAT GAGTCTGGGG GATGGAATGA CCAGACAACG GTAGAAGATA TGGACTTAGC TGTACGGGCT ACACTGAGAG GCTGGAAGTT TCTATATATC GATGATCTCA AGGTAAAAAG TGAGTTACCT TGTTCATTCA AAGCCCTGCG TAACCAGCAG CATCGATGGA CTTGTGGCCC TGCCAATCTA TTCAGGAAAA TGGCTGTACA AATATTAAGA AGCGAGAATG TTTCTCTATG GAAGAAGTTG TATATGTTGT ACAGCTTCTT CTTCATGCGC AAGGTCGTGG CTCACACCCT CACATTCTGC TTCTACTGTG TTATCTTGCC AGCAACTGTA TTGTTCCCAG AAGTCACAGT TCCGAAATGG GCTGCATTTT ATCTCCCTTC TTTGATCACT CTCTTAATCG CAATCGGTAG ACTAAGATCA ATCCACCTTT TGGCATTCTG GGTTCTGTTT GAGAATGCAA TGTCCCTGCT ACGAGCAAAG GCTCTGGTCA TGGGCTTGTT AGAAACAGGA AGAGTACAAG AATGGGTTGT GACGGAGAAA TTAGGTGATA CTCTGAAGAC GAAGCTGATT CCACAAGTGC CTAACGTCAA ATTCAGAGAG AGGGTGTATT TGCTGGAGCT ATTGGTTGGA GTGTACCTGT TATTCTGCGG AATCTACGAC ATCGTTTATG GGAAGAACAC ACTCTATGTG TACCTTCTGT TTCAGTCAGT GGCCTTCTTC GTTGTTGGTT TTGGATTTGT AGGAAAATAT GTTCCTGCTT CCTCTTACTT AGCATAGGAT AGATCAAAGA GTCTCAATAT GTTTCAGAAG GTTTTTTTTT GTTGATATCA TATTGAGAAC AATGCCTATA TACTACTCTA GTACTCTCCA TTTGTATTAA CACTTGAGTG TCTGTAAACA ACGAAGCTCA AATGTGACCA ATATATTTTT TTT 
Length1923
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16035364.. 16038258
Download Sequence
A.thaliana
AGI-codeAT2G35650.1
Descriptioncellulose synthase like
TAIR curator summarya member of Glycosyltransferase- Family 2 and encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. Mutants exhibit defects in pollen tube growth and embryo development. The defective embryonic development was associated with reduced proliferation and failed cellularization of the endosperm.
Alias[ATCSLA07][ATCSLA7][CSLA07][CSLA07][CSLA7][cellulose synthase like][CELLULOSE SYNTHASE LIKE A7]
Gene coexpression
MR
MR Locus Description
17.6635 Ahg907920 plastid transcriptionally active 4
24.5764 Ahg945268 Major facilitator superfamily protein
27.4955 Ahg485285 IQ-domain 21
32.3574 Ahg473493 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
36.3318 Ahg926613 Lung seven transmembrane receptor family protein
51.2348 Ahg951140 AMP-dependent synthetase and ligase family protein
52.192 Ahg474093 Calcium-dependent protein kinase (CDPK) family protein
53.1037 Ahg944002 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
56.1427 Ahg920383 DYNAMIN-like 1C
57.6541 Ahg933932 Ribosomal L28 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression