| Annotation |
|---|
| Description | jgi|Araly1|951140|scaffold_803027.1 |
| Sequence |
AATCGTCTTC ACTCTTCAAG AATGCAGACG AAAAACAACG ACAGCCGTTC GATTGACCGG AGCTCCGGCT TCGATCAACG GACAGGAATT TATCACAGTC TTCGCCCTTC TCTTTCTCTA CCTCCTATAG ATCAACCTCT CTCCACCGCC GAATTCGCAC TTTCTCTGCT CCGCAAATCC TCACCACCAG CCACCGCCGG GAAAAACATT GAAGCCTTAA CCTTCCTAGT TAACTCGAGC TCTGGTGATA GCCTCACTTA TGGAGAGCTT CTTCGTGGAG TTCGTTCTCT TGCTGTATCT CTCCGGGAGC GATTTCCTTC TCTTTCCTCC AGAAATGTCG CTTTTATCCT CTCTCCACCT TCGCTGCACA TACCAGTGCT TTACTTAGCT TTAATGTCGA TCGGTGTTGT TGTTTCACCG GCGAACCCAA TCGGATCTGA ATCAGAGGTG AGTCATCAGG TTGAAGTCAG TGAACCAGTA ATTGCGTTCG CGACATCGCA GACGGTTAAG AAGCTTCGGT CCTCATCTTT CCCTCTCGGA ATCGTTCTGA TGGACTCGCC TGAGTTTCTC TCCTGGTTAA ATCGATCGGA TGCTTCATCG GTTAATCCAT TTCAGGTTCG GGTCAACCAA TCGGACCCTG CCGCAATCCT CTTTTCGTCT GGAACTACCG GGCGGGTCAA AGGCGTTTTG ATCACTCACC GTAACCTAAT CGCCTCGACC GCCGTGTCTC ACCAACGGAC TCTCCAAGAT CCGGTTGATT ATGATCGCGT TGGACTGTTC TCGCTTCCGC TCTTCCACGT GTTTGGCTTC ACGATGATGA TTCGAGCCAT CTCGCTTGGA GACACGCTGG TGCTTTTAGG GAGATTCGAG CTTGAGGCGA TGTTAAAGGC GGTGGAGAAA TATAAGGTTA CTGGTATGCC TGTATCTCCT CCGTTGATTG TAGCATTGGT CAAATCGGAG CTAACGAAGA AGTACGATCT CCGGTCGTTG CGTTCTCTTG GCTGCGGCGG CGCTCCACTC GGCAAAGACA TCGCAGAGAG GTTCAAGCAG AAATTCCCAG ATGTGGAAAT TGTACAGGGC TATGGCTTGA CGGAGAGCTC GGGGCCAGCT GCGTCAACTT TTGGACCTGA AGAGACGGTA AAATATGGCT CAGTTGGTCG TATCTCTGAG AATTTGGAAG CCAAAATTGT TGATCCATCC ACCGGAGAAG CCTTGCCACC GGGAAAAACC GGTGAACTAT GGCTCCGAGG ACCAGTCATC ATGAAAGGTT ATGTGGGAAA CGAGAAAGCG AGTGCGGAGA CAGTAGACGA AGAAGGGTGG TTAAAGACTG GTGATCTCTG TTATTTTGAT GCGGAAGGTT TTCTATATAT TGTTGATCGG CTAAAGGAAC TAATCAAATA CAAGGCTTAT CAGGTTCCAC CGGTAGAGTT GGAGCAGATT CTTCACTCGA ATCCAGATGT GATTGATGCT GCAGTTGTTC CGTTCCCTGA CGAGGATGCA GGAGAGATTC CAATGGCTTT CATAGTGAGA AAACCAGGAA GCAATCTCAA CGAAGCGCAA ATCATTGATT TCGTAGCTAA ACAAGTTGCT CCGTACAAGA AGGTAAGACG AGTTGCTTTC ATAAATGCAA TCCCAAAAAA TCCTGCTGGC AAGATTCTGC GTCGGGAACT TACTAAAATC GCCGTGGATG GCAATGCATC AAAGCTTTGA GATAACCGGC CGGCTCAGAT AT |
| Length | 1732 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 19675226.. 19677721 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G63380.1 |
| Description | AMP-dependent synthetase and ligase family protein |
| TAIR curator summary | Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.3137 |
Ahg476539 | signal peptide peptidase |
| 17.3781 |
Ahg920418 | FAD/NAD(P)-binding oxidoreductase |
| 22.7816 |
Ahg486618 | plasma membrane intrinsic protein 1A |
| 27.0185 |
Ahg923463 | FTSH protease 1 |
| 28.6182 |
Ahg472998 | nuclear transport factor 2B |
| 34.9428 |
Ahg891467 | alpha/beta-Hydrolases superfamily protein |
| 44.4072 |
Ahg473938 | mitochondrial lipoamide dehydrogenase 1 |
| 44.4522 |
Ahg491144 | catalase 2 |
| 46.669 |
Ahg325438 | ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 |
| 46.9894 |
Ahg495834 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|