Detail



ID : Ahg482627

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482627|fgenesh2_kg.4__1687__AT2G36480.1
Sequence
ATGCAGGTAC CAAGTGATCA GAAGCTGCCA ACACTGTACC TGTTAGACAG CATTGTGAAG AACATCGGAA GGGATTACAT CAAGTACTTT GGTGCCAGGC TGCCTGAGGT TTTTGTTAAG GCTTACAGGC AAGTTGACCC TCCTATGCAT TCTAACATGC GGCATCTTTT TGGAACCTGG AAAGGAGTCT TTCATCCGCA AACACTTCAG CTTATTGAGA AAGAACTTGG CTTTAATGCT AAAAGTGATG GTTCAGCAGC TGTTGTATCC ACAGCCAGAG CTGAGCCGCA ATCTCAGCGC CCACCACATA GCATCCATGT GAATCCCAAG TATCTAGAAA GGCAGCGCCT TCAGCAGTCG GGACGGACAA AAGGAATGGT TACTGATACA CCAGAGATCG CACCCAATTT GACTAGGGAT TCAGATAGAC TGGAGAGAGT TTCAAGCATA GCATCTGGAG GCTCGTGGGT AGGTCCAGCT AAAACCATTC GGCGACCTCA AAGAGATTTA CTTAGTGAAC CCCTCTACGA GAAAGATATC GAGTCAATAG CAGGGGAATA TGATTATGCT TCTGATCTAC CCCATAACTC TAGATCGGTG ATTAAGAAAG TTGGTTCAAC GATGATTACT GATGACGGAT GTGAGAAACA ATGGTATGGA GCTATGAGCA GGGGTCCTGA TCTGATTTCT GACCAAAGGG ATGGGTTACA TACCAAAAGC AGAACTTCCA ACTATGCTAC GGCGAGACTA GCAAATTTGG AATCAAGTGG TCCCAGTATA AATATAGGTG TGCCTTGTGA TAGTTGGAAA AACTCTGAGG AAGAAGAGTT TATGTGGGAC ATGCACTCAA GGTTATCCGA AACTGATGTA GCTACTATCA ACCCAAAGAA CGAGCTTCAT GCACCAGATG AATCAGAGAG ACTGGATTCT GAAAACCACC TCTTAAAACG ACCAAGGTTT TCAGCTCTCG ACCCAAGGTT TGACCCAGCG AATTCCAGCG AGCAACAAGA TCCAAGTATT TTTGGTCACT GGACGTCTTC TCCAAGATCT TTGCATGATT CAGAAGTTTT TTCTTCTATT AATGCAACCT CTACTGCAGC TAGAAAGGGA ATTCAGCCTC AACCTAGGGT TGCCAGCTCT GGAATTTTGC CAAGCTCAGG ATCTGGGTCA GATAGACAGT CGCCTTTACA TGATTCAACT TCTAAACAGA ATGTGACCAA GCAAGATGTT AGAAGAGCTC ACTCCCTCCC TCAACGTGAT CCTAGGGCTT CCCGGTTTCC AGCAAAAAAT GTTCCCAGGG ATGACTCTGT ACGGATCCCA TCTTCAAGTA GTCAGTTTAA AAACACAAAT ATGCGTGAAC TACCTGATGC ATCTCAAGTG GAAATCTTTG ACTCTAAGTT GGCAGCTGAA AATGCTCCAG GCCTAACTAT TGCCTCAGAA GCTACAGGAC AACCCAACAT GAGTGATTTG CTGGAAGCTG TCATGAAGAG TGGAATCCTT TCTAATAATT CAACACATGG TGCGATCAAG GAGGAAATTT CTCAGGATGA GGTTAACCCA GGGGCACTAA CCCTATCAGC GGCCTCTAAG CCTAAGAATT TGCCATCAGC ATTGCCAATT TCAGTGGCTG GTGACAATTT ATTAGCTCGT TTAAAAGTTG AACAATCCTC CGCACCACTT GTCTCATGTG CAGCGTCTCT TACTGGCATC ACATCAGTAC AAACGTCAAA TGAGAATAGT AAGGCCTCAG ATCCTCTTTC ATGCCTCTTG AGCTCCTTAG TTTCAAAGGG CTTGATATCT GCTTCAAAGA CAGAGCAGCC AGCGGCTCCT TCCATAACGC AGGAACATAG TCCTGATCAT TCCACCAATA GCTCTATGTC TGTATCTGTG GTTCCATCAG ATGCTCAACC ATCTGTTCTG GTGAAGAAGG GGCCATCCAC TGCCCCTAAG GTAAAAGGGT TAACTGCATC TGAGACATCA AAATCTGAAC CTGAGGACCT CATAGGATTG AAGTTTAGGG CAGACAAAAT CCGTGAACTT CACCCCTCTG TCATTAGTAG TCTCTTTGAT GATCTTCCAC ATCTCTGCAC CTCCTGCGGC GTTCGCCTTA AACAAAAGGA AGAACTTGAT AGGCACATGG AGTTGCATGA TAAGAGTAAG GGCGAGTTAA GTGGCAAAAA CAGTAAATGT AGGGTTTGGT TTCCAAAGGT TGAAAACTGG ATTGCAGCAA AAGCTGGGGA GTTAGAACCT GAAGATGAGG AAGTTCTGAG TGAACCTGAG AGTGCTATTG AGGATGGTCC AGCCGTAGCT GCTGATGAGA CCCAATGCGC ATGTATATTA TGTGGAGAAG TTTTTGAGGA TTTTTTCAGT CAAGAAATGG CTCAATGGAT GTTCAAGGGA GCTTCTTACC TGACCAATCC TCCAGCCAAC AGTGAGGCCA GTGGTCCTAT CGTCCATACA GGTTGTCTGA CCACGAGTTC ATTACAGAGC TTGGAAGTTG GAAATGCAAT CAAGGAGGAA ATTGTTGAGT AGCCTCCATA TGCATATGAA GACCTATGGT GGAGGAATTA GTGGCATCAC AGAGGAAACA GGTTTGTGAT TCCTCATGAT GCTAGTTTTG TAGAAAAGTG CAAGCTTTGA GTTAAGGAAA AAAGATGTGC AGTATTTTTA ATTTTATTTT TTCTTACTTG TCTCTCTCCT TTTTCATCAT CATATACAAA TACAAAAAAA GCAAAAGAGG CCTTCCCAAT ATTGCACATT TCCATATTCT ATGCCTTTCT TT 
Length2782
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16406923.. 16438894
Download Sequence
A.thaliana
AGI-codeAT2G36480.3
DescriptionENTH/VHS family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg948327 cullin4
15.8745 Ahg477743 RNA polymerase II transcription mediators
17.088 Ahg898458 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
18.4391 Ahg482185 hydroxyproline-rich glycoprotein family protein
19.4422 Ahg933578 Ypt/Rab-GAP domain of gyp1p superfamily protein
20.3961 Ahg925691 Arginyl-tRNA synthetase, class Ic
21.9089 Ahg480572 ubiquitin-conjugating enzyme 23
24.7386 Ahg893981 Myosin family protein with Dil domain
31.305 Ahg490504 RNAhelicase-like 8
35 Ahg920156 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression