| Annotation |
|---|
| Description | jgi|Araly1|948327|scaffold_800214.1 |
| Sequence |
CACAATTTTC ACCCATTTTC ATGTCTCTTC CTACCAAACG CTCTACTTTC TCCGCCGCTT CTGCCTCCGA CGACTCTTCT TACTCTTCTC CTCCGATGAA AAAGGCTAAA AACGACCTCC ACCATTCCCC GCAACACCCT AACACCGCCG ACAAGGTTGG CTTTCATATG GAGGAAGATC CAACTCCCGC CGCTGCGAAT CTCTCTCGGA AGAAAGCTAC ACTACCGCAA CCTACTAAGA AGCTTGTAAT CAAGCTCAAT AAAGCCAAAC CAACCTTGCC AACAAACTTT GAGGAGACTA CATGGGAGAA GTTGCAGTCA GCTATCAGAG CTATATTCCT CAAAAAACCA TTTTCTTTTG ACCTCGAGAG CCTCTACCAG GCTGTTGATA ACCTTTGCTT GCATAAGTTA GAAGGAAAGC TCTATGACCA GATTGAGAAG GAGTGTGAAG AACACATCTC TGCAGCTTTG CAATCTTTAG TTGGGCAGAA CACTGATCTG ACTGTTTTCT TGTCACTTGT TGAGAAATGC TGGCAAGACT TTTGTGACCA GATGCTCATG ATCCGTAGTA TAGCCTTGAC TCTGGATAGG AAGTATGTGA TACAAAATCC AAATGTACGT TCATTATGGG AGATGGGTTT GCAGCTTTTC CGGAAGCATC TTTCTCTGGC CCCTGAAGTT GAGCAGAGGA CTGTTAAAGG TCTCTTAAGT ATGATCGAAA AAGAAAGATT AGCAGAAGCT GTTAATAGGA CTCTACTAAG CCATCTTTTG AAGATGTTTA CTGCACTGGG AATATATATG GATAGCTTTG AGAAACCTTT CCTTGAAGGG ACTTCTGAAT TTTATGCTGC TGAAGGAATG AAATACATGC AGCAGTCTGA CGTTCCGGAG TACCTGAAGC ATGTTGAGGG AAGGTTGCAT GAAGAGAATG AAAGATGCAT ACTCTACATA GATGCAGTAA CAAGGAAACC ATTGATCGCA ACTGTTGAAA GGCAGCTTCT CGAACGTCAT ATACTTGTTG TTCTTGATAA GGGGTTTACA ACATTAATGG ATGGACGTCG TACTGAGGAC CTTCAGAGGA TGCAAACCCT GTTTTCTAGG GTCAATGCAC TTGAGTCTCT GAGGCAGGCG CTAAGTTCAT ATGTTCGGAA AACTGGGCAG AAGATTGTGA TGGATGAAGA GAAAGATAAA GATATGGTAC AATCACTATT GGACTTCAAG GCTTCTCTTG ACGTAATATG GGAAGAGAGC TTTAATAAGA ACGAATCATT TGGTAACACA ATCAAAGATT CATTTGAGCA TCTGATTAAT CTTCGTCAGA ACCGGCCAGC TGAGCTTATT GCCAAGTTTT TGGACGAGAA GCTCCGTGCT GGGAATAAAG GTACTTCTGA AGAAGAACTG GAGAGTACTC TTGAAAAAGT CTTGGTTTTG TTCAGATTTA TCCAGGGTAA AGATGTGTTC GAAGCATTTT ACAAAAAGGA TCTTGCGAAG AGACTCCTGT TGGGAAAGAG TGCTTCAATT GATGCCGAGA AATCCATGAT ATCTAAGCTT AAAACTGAGT GTGGTAGCCA GTTTACTAAC AAGCTCGAAG GGATGTTCAA GGATATTGAA TTGTCAAAGG AAATCAATGA GTCATTCAAA CAATCTTCTC AGGCCAGAAC CAAATTACCA TCGGGAATTG AGATGAGTGT CCACGTGTTA ACAACAGGTT ACTGGCCAAC ATATCCACCT ATGGATGTTA AGCTTCCTCA TGAACTAAAT GTCTATCAGG ATATCTTCAA AGAGTTCTAT TTAAGCAAGT ACAGTGGTAG GAGGCTAATG TGGCAAAACT CATTAGGTCA CTGTGTTTTA AAGGCAGATT TCTCCAGAGG TAAAAAGGAG CTGGCTGTTT CCCTGTTTCA GGCTGTTGTG TTGATGTTAT TTAACGATGC AATGAAACTT AGCTTTGAAG ACATTAAAGA TTCCACCAGC ATAGAGGACA AAGAGCTGAG GAGGACGTTG CAGTCGCTTG CTTGTGGGAA AGTTCGTGTC CTGCAGAAGA ATCCAAAGGG AAGAGATGTA GAAGATGGTG ATGAATTTGA ATTTAATGAC GACTTTGCAG CTCCTCTATA TCGCATTAAG GTAAATGCAA TCCAGATGAA AGAGACAGTG GAGGAGAACA CAAGTACAAC GGAAAGAGTA TTCCAGGACC GACAATACCA GATCGATGCG GCCATTGTTC GTATTATGAA GACAAGAAAA GTCTTAAGCC ATACTCTTCT AATCACTGAG CTCTTCCAAC AGCTCAAATT CCCGATAAAG CCTGCTGATC TGAAGAAGAG GATTGAAAGC TTGATCGATC GAGAATATTT GGAGAGGGAA AAAAGCAATC CTCAGATATA CAATTATCTT GCTTAGAATC TCTCTGGTAA ACGCCT |
| Length | 2416 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 1099407.. 1104599 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G46210.1 |
| Description | cullin4 |
| TAIR curator summary | Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. |
| Alias | [ATCUL4][CUL4][cullin4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg491781 | |
| 3.74166 |
Ahg483908 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 3.87298 |
Ahg924607 | transcription factor jumonji (jmjC) domain-containing protein |
| 4.89898 |
Ahg482627 | ENTH/VHS family protein |
| 5.2915 |
Ahg473899 | exocyst complex component sec3A |
| 7.61577 |
Ahg488891 | Domain of unknown function (DUF1767) |
| 10.3923 |
Ahg494187 | D6 protein kinase like 2 |
| 11.4018 |
Ahg931395 | golgin candidate 1 |
| 12 |
Ahg473680 | O-fucosyltransferase family protein |
| 14.1774 |
Ahg487067 | ubiquitin-protein ligase 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|