Detail



ID : Ahg482752

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482752|fgenesh2_kg.4__1812__AT2G37560.1
Sequence
TCTTTCCTAC ATAGGAATTC AGTTAAGGTG AAAATGGAGG ACATTGAGAA CATGGAAGAA GATGAGTATG GCTTCTCAAG AAACTACTTT TTGGCAAAAG AATTGGGTGG GGCCAGTAAG CGGTCAGCTC ACAAGCTCTC TGATATTCAT ATTGTTGATG AGCAGGAGCT TAGAGAAACA GCAATTGAAA TGAAGCACGC GAAAGAGGTA TCTGAGCTTA TGAGTGATTA CAAGACTATG TACTCAAACT GGGTCTTTGA GCTCAGGTGT GGCTTTGGCC TTCTAATGTA TGGCTTTGGA TCTAAGAAAG CTTTAATTGA AGATTTTGCT TCTGCTTCTT TGACTGAGTA TTCGGTTATG GTCATCAATG GCTACCTCCC TTCCGTAAAT CTAAAGCAGG TTCTTTTAGC TTTAGCTGAA CTTCTGTCTG AGCTTTTGAA ATGTAAAAGA AAGAGTTCCG GGAGTTTGTC TAAAGGTCAA GAAACATTTC CTTCACGCTC CATGGATGAT ATTCTTTCCT TTCTACATGG TCCACAATCC GAAGATAAAG ACTGCTTCAT ATGCGTTGTT GTTCATAACA TTGACGGCCC TGCTCTAAGA GATCCCGAAT CACAACAAAC TCTTGCCCGA CTTGCTTCTT GTTCACACAT ACGCATGGTT GCCTCTATTG ACCATGTCAA CTCTCCATTA TTGTGGGACA AGAAAATGGT GCACAAACAA TTCAACTGGC TGTGGCACCA TGTTCCAACA TTTGCACCAT ACAATGTCGA AGGTGTTTTC TTCCCGTTGG TTCTTGCACA GGGAAGCACA GCCCAAACCG CCAAAACAGC AGCCATTGTC TTACAGAGTT TAACACCAAA TGCTCAGAAT GTCTTCAAGA TTCTTGCAGA GTACCAACTT TCACACCCAG ATGAAGATGG CATGCCCACT GATGATCTGT ATTCAGCCTC TCGGGAACGC TTCTTTGTGA GCAGTCAAGT GACTTTGAAC TCTCATCTCA CGGAATTTAA AGACCACGAA CTGGTTAAGA CCAAGAGAAA CTCCGATGGT CAAGAGTGTT TGAATATACC TCTCTCTTCA GATGCACTTC GACAGCTCTT GCTTGATCTC AATCAGTAGC ATGAAATTGT ATCTCTGATA TGATTCATTT TTATTGCTTG AACGAGTTCA CATA 
Length1174
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17051444.. 17067476
Download Sequence
A.thaliana
AGI-codeAT2G37560.1
Descriptionorigin recognition complex second largest subunit 2
TAIR curator summaryOrigin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.
Alias[ATORC2][ORC2][ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2][origin recognition complex second largest subunit 2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg490695 NmrA-like negative transcriptional regulator family protein
4 Ahg493471 Splicing factor 3B subunit 5/RDS3 complex subunit 10
4.24264 Ahg481615 P-loop containing nucleoside triphosphate hydrolases superfamily protein
8.3666 Ahg481427 ATP-dependent protease La (LON) domain protein
10.3923 Ahg483719 DEA(D/H)-box RNA helicase family protein
13.2665 Ahg488862 Leucine-rich repeat (LRR) family protein
15.5885 Ahg480586 F-box family protein with a domain of unknown function (DUF295)
21.8174 Ahg492266 C2H2-like zinc finger protein
22 Ahg472757 Cobalamin biosynthesis CobW-like protein
24.2487 Ahg488831 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression