| Annotation |
|---|
| Description | jgi|Araly1|488831|fgenesh2_kg.6__1965__AT5G19420.1 |
| Sequence |
GGTCTCTTTC TTCTCTCTCG CTTCTCTAGC TAGATTCTCA ATTCCCTAAA TTCCTCTCGC GTTGGGATCG ATTTGAATCT AACTGGAGCT GAAGAAGCTG CTCTAGCTTC GAATTGAATT ATAGATCGAC GATCATAGTG ATGTGGAGAG GATTTCGTGA TTGCAAGAGG TCTTTTGATT TGAGCTTGAC GACTAGTGTC GATTTCTTCT CGGCTCACTG AGGAATTTTG TTTATGTCGA GGAACGGACG AATGGCGTCC TCGGATCTTA CTAGTAGAGC CGGTCCAGTG ACGAGGGACA TTGAGCAGGC TATCACTGCC CTTAAGAAAG GAGCTTATTT GCTTAAGTAT GGCAGAAGGG GAAAGCCTAA GTTCTGTCCA TTTCGCCTTT CAAATGATGA ATCTGTTTTG ATATGGTTTT CGGGGAAGGA GGAGAAACAT TTGAAGCTAA GTCATGTCTC CAGGATCATA TCTGGGCAGC GCACTCCTAT TTTTCAAAGA TATCCACGTC CCGAGAAGGA ATATCAATCG TTCTCACTAA TATATGACGA GAGGTCACTG GATGTGATAT GCAAAGATAA AGATGAGGCT GAAGTGTGGT TTAGCGGTTT AAAAGCCTTG ATATCTCGTT GTCATCAACG GAAATGGAGG ACCGAATCGA GAAGTGATGG AACGCCATCC GAAGCTAATA GTCCGAGAAC ATATACCCGG AGAAGCTCCC CTTTACATTC TCCATTTAGT AGCAATGAAA GTTTCCAGAA GGAGGGCTCA AATCACCTTC GTCTTCACAG TCCATATGAG AGCCCGCCTA AGAATGGCAT TGACAAGGCA TTTTCAGACA TGTCGTTGTA TGCAGTTCCT CCAAAAGGTT TTTTTCCCCC AGATTCGGCA ACCATGTCTG TTCACTCTTT ATCATCTGGA GGCTTAGATA CACTACATGG TCACATGAAA GGAATGGGTA TGGATGCTTT TAGAGTTAGT CTGTCAAGTG CGATTAGTTC GTCGAGCCAT GGTTCTGGTC ACGATGATGG AGACACATTG GGAGACGTTT TCATGTGGGG AGAAGGAATA GGCGAAGGTG TTTTGGGTGG TGGAAATTAC AGAGTTGGAA GTTCGTTGGA GATCAAAATG GATTCCTTAT TGCCAAAAGC TTTAGAGTCT ACTATAGTAC TTGATGTACA GAATATTGCT TGTGGTGGAC AACATGCTGT CCTTGTGACA AAACAAGGAG AAAGTTTTTC TTGGGGAGAG GAATCTGAAG GTAGGCTTGG CCATGGTGTA GATTCCAATG TTCAACATCC AAAGCTCATT GATGCCCTCA GTACCACAAA TATTGAGCTT GTAGCATGTG GTGAATACCA TAGTTGTGCA GTTACTCTAT CGGGGGATTT GTATACCTGG GGTAAAGGAG ATTTTGGTAT TCTGGGACAT GGAAATGAAG TCAGTCACTG GGTCCCCAAA AGAGTAAATT TTCTGATGGA AGGGATACAT GTATCATCCA TCGCTTGTGG ACCTTACCAC ACAGCTGTTG TGACTTCTGC TGGCCAGTTG TTTACTTTTG GTGATGGGAC CTTTGGTGTT TTGGGCCATG GAGACAGGAA AAGTGTTTTC ATACCTAGAG AGGTAGACTC CTTGAAAGGT CTTCGCACTG TTCGGGCAGC CTGTGGTGTA TGGCACACAG CCGCAGTTGT AGAAGTCATG GTTGGGAGCT CGAGCTCTAG TAACTGCTCT TCAGGAAAGC TCTTTACATG GGGTGATGGT GACAAGAGTC GTCTTGGTCA CGGTGACAAA GAACCAAAAC TTGTGCCTAC CTGTGTTGCA GCTCTTGTAG AACCCAATTT TTGTCAAGTT GCGTGCGGAC ATAGCCTAAC AGTTGCACTG ACAACATCGG GCCATGTCTA TACTATGGGT AGTCCTGTTT ATGGTCAGCT TGGAAACCCA CATGCAGATG GAAAGGTTCC AACCCGTGTT GAAGGTAAAC TTCACAAGAG TTTTGTCGAA GAGATTGCTT GCGGTGCTTA TCATGTTGCA GTTTTAACTT CAAGGACTGA GGTTTACACT TGGGGAAAAG GATCAAATGG TAGACTAGGC CATGGGGATG CAGATGATCT AAATTCCCCG ACATTGGTTG AGTCGCTGAA GGATAAACAG GTGAAAAGTA TTGCCTGTGG TTCTAACTTC ACCGCAGCTG TTTGCCTTCA CAAGTGGGCA TCAGGGATGG ACCAGTCCAT GTGTTCAGGT TGCCGTCAGC CTTTCAATTT CAAGAGAAAG CGGCACAATT GTTATAACTG TGGACTTGTG TTTTGCCATT CTTGCACTAA TAAAAAGTCC CTGAAGGCTT GTATGGCACC GAACCCGAAC AAACCATATA GAGTGTGTGA TAGGTGTTTC AATAAATTGA AAAAGGCCAT GGAAACGGAT CCATCATCTC ATTCTTCTTT GAGTCGAAGA GAAAGTGTCA ACCAAGGATC AGATGCAATT GACAGAGATG AGAAGTTGGA TACTAGATCT GACGGACAGC TAGCTAGATT CTCATTGTTG GAGCCCATGA GGCAAGTGGA CAGTCGTTCC AAGAAAAATA AGAAATATGA ATTCAATAGT AGTCGTGTCT CACCAATACC AAGTGGAGGC TCTCACCGGG GTTCACTAAA CATAACCAAG TCTTTTAACC CAACCTTCGG ATCATCAAAA AAGTTCTTCT CAGCATCAGT TCCTGGTTCC CGAATTGTGT CTCGAGCAAC TTCACCAATA TCAAGACGTC CTAGCCCACC TCGCTCAACA ACGCCAACTC CCACTCTTTC AGGACTAACT ACACAAAAAA TTGTCGTGGA TGATACCAAG AGAACCAATG ATAACCTAAG CCAGGAGGTG GTTATGCTAA GATCTCAAGT TGAAAATCTT ACACGGAAGG CACAGCTTCA AGAAGTTGAA TTGGAAAGAA CAACCAAACA GCTAAAGGAG GCACTAGCAA TCGCTAGCGA AGAATCAGCA AGATGCAAGG CAGCGAAAGA AGTGATTAAA TCACTTACCG CTCAATTGAA AGACATGGCT GAAAGACTAC CTGTTGGATC AGCTCGGACT ATCAAGTCTC CTTCTCTTAA TTCATTTGGT TCCAGTCCTG ATTACGTTGC CCCTTCTTCT AACACCTTAA ACCGTCCAAA CAGCCGAGAA ACTGATTCTG AGAGCCCAAT GACCGTCCCA ATGTTTTCCA ACGGGACCAG CACACCTGTT TTCGATAGTG CAAGTTACCG ACAGCAAGCT AATCATGCTG CTGATGCAAT AAATAGAATC AGCACACGAT CAAAAGAAAG TGAACCCCGT AACGAGAAGG AATGGGTTGA ACAAGATGAA CCTGGTGTGT ACATCACTCT CACAGCCTTA GCTGGAGGTG CAAGGGATCT CAAACGTGTC CGTTTCAGTC GGAAGCGGTT TAGCGAGAAA CAAGCAGAAG AATGGTGGGC AGAGAACAGA GGAAGAGTTT ACGAACAATA CAATGTACGC ATAGTCGTTG ATAAATCCAG TGTGGGTGTA GGGAGTGAAG ACTTGGGTCA TTAGTATTCT TTGTTTACCC CAATATAACA CAGAAAACCG GAGTTTCCCA CTCATCTATT CTTTTTTTGG TCAACACGGG TTTCATAGGT TTATTGGGGA TTTTAACCAA GAGAGAAAAT AGTTTTCATG TGTAAATTCT TTTGTAAATT CTATAAACAT ACATTGTTTC TTTCTTTCTC TCTATAAATG CTATTATTTG CTGTGGAAAT TCAAACAGCA CTAA |
| Length | 3774 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7832289.. 7837825 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G19420.2 |
| Description | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.3041 |
Ahg939541 | mRNA capping enzyme family protein |
| 16.7033 |
Ahg486320 | Protein of unknown function (DUF1637) |
| 24.2487 |
Ahg482752 | origin recognition complex second largest subunit 2 |
| 25.632 |
Ahg487227 | RING/U-box superfamily protein |
| 26.3059 |
Ahg485684 | ubiquitin-protein ligase 7 |
| 27.1662 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 28.5657 |
Ahg357183 | |
| 30.7246 |
Ahg482883 | AMMECR1 family |
| 32.0156 |
Ahg924045 | calpain-type cysteine protease family |
| 32.4962 |
Ahg489232 | dual specificity protein phosphatase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|