Detail



ID : Ahg490695

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490695|fgenesh2_kg.7__128__AT4G39230.1
Sequence
ACAGAGGGTA TTATTGTCAT TATAATAAGC CGCTTCTCTC TCTCTCAGAG TGGGTTCATA CTATTTATAA AAAGCCGCAA TTTTGGGATC ATAATTCTCT TCTTTCATCT GTGAACCACT CCGTTGTTAC CCGCCATCTC TCTCCGAGCC TAAAAATGAC GAGTAAGAGC AAAATCTTGT TCATCGGAGG AACGGGTTAC ATTGGGAAAT ATATAGTGGA AGCGAGCGCA AGATCTGGGC ACCCAACCTT AGTTCTCGTT CGAAATTCGA CGCTCACAAG CCCTTCACGA TCGATCACCA TCGAGAATTT CAAGAATCTC GGCGTTCAGT TTCTCCTCGG AGATCTTGAC GATCATACGA GTCTCGTGAA TTCGATAAAG CAAGCAGATG TGGTCATCTC TACGGTTGGA CATTCCCTCT TGGGACATCA ATACAAGATC ATCTCTGCCA TTAAAGAAGC CGGTAATGTT AAGAGATTCT TTCCCTCAGA GTTTGGAAAT GATGTAGACC GTGTTCACGC TGTTGAACCC GCCAAGTCAG CCTATGCTAC AAAGGCAAAT ATCCGGCGAA CAATTGAAGC CGAAGGAATC CCATACACTT ATGTCTCATG CAACTTCTTC GCTGGCTACT TCCTTCCAAC TCTGGCACAG CCTGGGGCTA CTTCTGCTCC TCGGGATAAG GTCATTGTTT TAGGTGATGG AACCCTCAAA GCTGTGTTCA ACAAGGAAGA AGACATCGCG ACTTACACCA TCAATGCCGT AGATGATCCA ACAACTTTGA ACAAGATCTT ATATGTTAGG CCACCAATGA ACACTTACTC CTTCAACGAT CTTGTCTCGC TTTGGGAGAA CAAGATTGGC AAAACACTTG AAAGAATCTA CGTTCCAGAA GAGCAACTCC TCAAACAGAT CATAGAATCT TCGCCTCCAC TCAACGTGAT GCTATCCCTT TGTCACTGCG TTTTCGTGAA AGGAGGACAC ACAAGCTTTG AAATCGAACC TTCTTTTGGA GTAGAAGCTT CTGAGCTTTA CCCTGATGTC AAATACACTA CTGTTGATGA AATCCTCAAC CAGTATGTCT AAAGCTTAGT GCTTAACTAC AGTGTCACTC CATGACTCTC CACACTTTTT ATTTTGGGTT TTAAATAATT GGCTA 
Length1155
Protein Sequence
Protein Residue
Map Locationscaffold_7: 426805.. 428594
Download Sequence
A.thaliana
AGI-codeAT4G39230.1
DescriptionNmrA-like negative transcriptional regulator family protein
TAIR curator summaryencodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg482752 origin recognition complex second largest subunit 2
7.48331 Ahg897921 centrin2
11.4891 Ahg936241 Protein of unknown function, DUF617
16.3095 Ahg918735 Leucine carboxyl methyltransferase
19.799 Ahg487615 conserved peptide upstream open reading frame 16
24.98 Ahg483767
32.9848 Ahg312852
36.4692 Ahg492350
40.4104 Ahg936010 Protein of unknown function (DUF1664)
45.4423 Ahg483476 Signal recognition particle, SRP9/SRP14 subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression