Detail



ID : Ahg483004

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483004|fgenesh2_kg.4__2064__AT2G39770.1
Sequence
TGCCTATCAT TTTGCCAACG AACGTTCTTT CTGCATCACA GCTCAGCCTG ACGCAAACCG CTCAGGCTGA TCTCTTCCAT TTTACAGCCA TTTCCCAGCT CAGATCTCTG ATCCGGTGAG ATCTCTTTCA AGGGAAAGGA GTTAGAGCAT AAAGATGAAG GCACTCATTC TTGTTGGAGG CTTCGGCACT CGGTTGAGGC CATTGACTCT CAGTTTCCCA AAGCCGCTCG TTGATTTTGC AAATAAACCC ATGATCCTTC ATCAGATAGA GGCTCTTAAG GCAGTTGGAG TTGATGAAGT GGTTTTGGCC ATCAATTACC AGCCAGAGGT GATGCTGAAC TTCTTGAAGG ACTTTGAGAC CAAGCTCGAA ATCAAAATCA CTTGCTCACA AGAGACCGAG CCACTAGGTA CGGCTGGTCC TCTGGCTCTA GCGAGAGACA AATTGGTTGA TGGATCTGGA GAGCCCTTCT TTGTTCTTAA CAGTGATGTG ATTAGTGAGT ACCCACTTAA AGAAATGCTT GAGTTTCACA AAACTCACGG CGGGGAAGCC TCCATAATGG TGACAAAGGT GGATGAACCG TCTAAATATG GAGTGGTTGT TATGGAAGAA AGTACAGGAA AAGTGGAGAA GTTTGTGGAA AAGCCAAAAC TGTATGTAGG TAACAAGATC AACGCTGGGA TTTATCTTCT GAACCCATCT GTTCTTGACA AGATTGAGCT AAGACCGACC TCGATCGAAA AAGAGACCTT CCCTAAGATT GCAGCAGCGC AAGGGCTCTA TGCTATGGTC CTACCGGGAT TTTGGATGGA CATTGGGCAA CCCCGTGACT ACATAACCGG TTTGAGACTC TACTTAGACT CCCTTAGAAA GAAATCTCCT GCCAAGTTAA CCAGTGGTCC ACACATTGTT GGGAATGTTC TTGTTGATGA AACTGCTACG ATTGGGGAAG GATGTTTGAT TGGACCAGAC GTTGCCATTG GTCCGGGATG CATTGTTGAG TCAGGAGTCA GGCTCTCGCG ATGCACGGTC ATGCGTGGAG TCCGCATCAA GAAGCATGCA TGTATCTCGA GCAGTATCAT CGGGTGGCAC TCAACGGTTG GACAATGGGC CAGGATTGAG AACATGACGA TCCTTGGAGA AGATGTTCAT GTGAGCGATG AGATCTATAG CAATGGAGGA GTTGTTTTAC CACACAAGGA GATCAAATCA AACATCTTGA AGCCAGAGAT AGTGATGTGA AAAATGTGAT ATTATATGTG CAACTTTTTT TTTTTTTTTT TGTGTCCTTT TTTTAACTTT AAATCGCTTT CGTTATTCTT GTTGGCTTTT GAATAAGCAA GCATCAATCA AAACGCTGTA TATCTTGTTA GAGTCATTTG GTGTTTTGTC TCTTTTTGTA TTTGTAATTT ATTAAAACTA TTCTCAGTTT ATGTGAGATA CTTTTGAATA TTCATTAATT ATAAAGCTTT TT 
Length1472
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18318190.. 18320621
Download Sequence
A.thaliana
AGI-codeAT2G39770.1
DescriptionGlucose-1-phosphate adenylyltransferase family protein
TAIR curator summaryEncodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.
Alias[CYT1][EMB101][GMP1][SOZ1][VTC1][CYTOKINESIS DEFECTIVE 1][EMBRYO DEFECTIVE 101][GDP-MANNOSE PYROPHOSPHORYLASE 1][SENSITIVE TO OZONE 1][VITAMIN C DEFECTIVE 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg476213 phosphoglucomutase, putative / glucose phosphomutase, putative
4.58258 Ahg946577 cellulose synthase-like A01
6.9282 Ahg317230 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase
7.14143 Ahg473078 GDSL-like Lipase/Acylhydrolase superfamily protein
8.48528 Ahg923674 IAA-leucine resistant (ILR)-like gene 5
9.38083 Ahg483513 chloroplast outer envelope protein 37
10 Ahg480634 Auxin efflux carrier family protein
11.5326 Ahg915315 nudix hydrolase homolog 8
11.8322 Ahg478435 dual specificity protein phosphatase (DsPTP1) family protein
12.2474 Ahg472278 OPC-8:0 CoA ligase1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression