| Annotation |
|---|
| Description | jgi|Araly1|483232|fgenesh2_kg.4__2292__AT2G41540.2 |
| Sequence |
TGTCCATTCC TCTCCCTTTG CACAATAAGC TTTGCTCTGT ATTTAATTTA ACTCTTCTTC TGCATGCAAG TTTTGATGAT TCCCAAATCT TTCTCATGCG TTTTTTACTT TCTTGATTTG GCAATTCTCA TGAGCTGATT TGATATCTTA CTTCTTTATG GTTGCCGACA CGAAAGTCTT CTTTTGGTAG ATGAACAACT CAAAATTTGT TTGGTGAGAA AAATCAACCA AGAAAATCTT GTTATTTTTT GGAGCAAGGA GTTGGTAATG CTCAAGTTGG TCTCTCTGTT TTTTTTTTCA AATCCAACTT GATTTCTTTG TTCTCTATGA TCCAAACCCA TATATAAATC TGTAGTGGAT TAAAATCATT TCTAGACATT GTTCAGTATT GTCTTTGGTT TGTTTGAACT TCTTGTGTTT GTGTGGACCA AAAGAAGAAG GAATGGTGGG AAGCATTGAG GCCAAAAGCC TGCAATCAAA TGGGTCTGTT CATCATAATG GTCTTAATTT GGAGGAGAAA CTTGACGAAT TTCGTCGACT TTTGGGGAAA TCTGACAAAG ATCCGCTAAG GATTGTAAGT GTTGGTGCTG GTGCTTGGGG GAGTGTTTTT GCAGCACTTC TTCAAGAAAG CTATGGAAGT TTCAGGGATA AGTTTCAGAT CAGGATATGG AGAAGAGCTG GGAGAGCTGT TGATAGAGAA ACTGCAGAAC ATTTGTTTGA AGTGATCAAT TCAAGGGAAG ATATCTTGAG GAGACTGATA AGACGCTGCG CTTATCTGAA ATATGTTGAG GCAAGGCTCG GTGATAGGAC GCTCTATGCT GATGAGATTT TGAAAGACGG GTTTTGTCTT AACATGGTTG ACACGCCGCT TTGTCCTCTC AAGGTTGTGA CAAATCTGCA AGAAGCAGTG TGGGATGCTG ATATTGTTGT TAATGGATTG CCTTCAACAG AAACACGTGA AGTGTTTGAA GAGATTAGTA AGTATTGGAA AGAGAGAATA ACGGTTCCGA TTATTATCTC TCTGTCAAAG GGTATTGAAA CTGCTCTTGA ACCAGTTCCA CATATCATAA CTCCAACAAA GATGATTCAT CAAGCAACTG GTGTGCCGAT TGACAATGTC CTGTATCTTG GTGGACCGAA CATTGCTGCT GAAATTTACA ACAAGGAATA TGCCAATGCT AGAATCTGCG GAGCTGCTAA ATGGAGGAAG CCACTAGCTA AGTTCTTAAG ACAACCTCAT TTCATTGTTT GGGACAACAG TGATCTTGTG ACACATGAAG TAATGGGAGG TCTCAAGAAT GTCTACGCCA TTGGAGCTGG AATGGTAGCG GCGCTCACTA AAGAGAGCGC TACAAGCAAG TCGGTGTATT TTGCTCATTG TACATCTGAG ATGATATTTA TAACTCATTT ACTAGCAGAA GAGCCTGAGA AACTTGCAGG GCCTTTGCTA GCTGACACTT ATGTGACGTT ATTAAAAGGG CGTAATGCGT GGTACGGGCA AATGCTGGCA AAGGGGGAAA TAAATAGAGA CATGGGTGAT AGCATAAGCG GCAAGGGAAT GATTCAGGGT GTTTCTGCTG TGGGAGCATT TTACCAATTG CTTAGTCAGT CAAGCTTAAG TATATTGCCC TCTGGAGAGA AGAAACTTGT AGCCCCGGTA GAATCATGTC CTATTTTGAA GACACTTTAC AAGATACTCA TCACAAGAGA ACAATCAACA CAAGCTATTC TGCAAGCGTT AAGGGACGAA ACATTGAACG ATCCAAGAGA CCGTATTGAG ATTGCACAGA GCCATGCATT CTACAGGCCT TCCCTTCTTG GTCAGCCTTG ATTAGTCAGT CATGGCTTTT ATAAGAGATA CAACATAAAT TACTTGTGCA AGCTGCAGAT GCTTCATTAA AACATTATAG CTTTAATTTG AAACATTATA GTTTCAAATC TGTCATAACT TGAAATGGAT TCTTTGTTTA GTACCTGAGT CAATGCAATC CTTGTATCAT TTTCTTTATG ATCAATGAGA GCTTTATTTG CTCAAACAAT TTTACTTGAA GAAAGAAAAC ACACATTTT |
| Length | 2069 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19223573.. 19226388 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G41540.1 |
| Description | 6-phosphogluconate dehydrogenase family protein |
| TAIR curator summary | Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene. |
| Alias | [GPDHC1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 20.8806 |
Ahg945946 | SKU5 similar 4 |
| 31.749 |
Ahg919156 | Pectin lyase-like superfamily protein |
| 35.4683 |
Ahg485285 | IQ-domain 21 |
| 38.4578 |
Ahg495659 | FASCICLIN-like arabinogalactan 1 |
| 44.4972 |
Ahg935562 | cytochrome P450, family 86, subfamily A, polypeptide 8 |
| 45.0999 |
Ahg359596 | |
| 46.2169 |
Ahg485932 | ABC-2 type transporter family protein |
| 47.4025 |
Ahg492450 | Protein of unknown function, DUF538 |
| 50.4777 |
Ahg901436 | FASCICLIN-like arabinogalactan protein 16 precursor |
| 52.915 |
Ahg470852 | GATA transcription factor 11 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|