Detail



ID : Ahg483326

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483326|fgenesh2_kg.4__2386__AT2G42330.1
Sequence
GAGGAGAAGA AGATTGTTGA GGTCACTGTT AGTGAGAATC ATGGTGATGG AAGGAGGAAT CTTTGGAAAA AGAAGAATGT GAGGAAGGAA GTTTATATTA CTGCAGAGGA GTTTTTGGGG AAGAAACAGG AAGAGGGTTT TGGTTGTGGT CAGACCATTA TTGATAAGCG AGGACCACAA GGTCGAGTTG TTAAAAGTTT ACGAAATTTA TACGCAGAGG AGAAAGCAAG AGATGCCAAT GTTCCACAGC CAGAGTTACA GCATAACTTG AGGTTTATTG TTGAGTCAGT CGAGCATGGA ATTCTGAAGA TTGATAAGGA TTTGAGGAAC GAGAAAGAAT TAGCCTTGAG CTTGCAGCAA GAGAAGGAGA AATTTAAAAT GGGGGAAAAG AAACAAAAAA TGCTGTTTGA CAACTTGGGA TATATTGCAG AGGAAATCGA TCGAATTGAG ATGGAGATTG CTTCTGGGAA TTTAACATTG GATTCACTTG CCAATCATTT CAAGGACCTG CGTTCAAGCT ATCCTGATGA CTATAAGAGT TGTAAATTGT CATGCATTGC TTGCTCACTC GCCTTGCCTC TCTTTATCAG GATGTTTCAG GGTTGGGACC CTCTGAGTGA TGCAGAGCAT GGTATCGAGG CTATTTCTTC CTGGAAAATG CTGCTGGAAG TTGAGGACAA TCAAAGTATC TCGACGCCGT TTAGCCAACT TGTCTCAGAG GTAATTTTAC CTGCTGTGCG AGTATCAGGC ATCAATACTT GGGAACCTAG AGATCCGGAG CCAATGCTGA GATTTGTAGA GACATGGGAG AAAATGCTAC CCTCACTTAT TTTCGAAACG ATTTTGACCA CAGTAGTGCT GCCAAAATTG TCAACGGCTA TTGAATCTTG GGAACCACGT TTGGAAACGG TTCCCATCCA TGTTTGGGTG CATCCGTGGC TGCCAGTGCT TGGTCAGAAG TTGGAAAGTG CGTATCAGAT TATTCGGATG AAATTCGGTA ACCTTCTCGA TGCTTGGCAT CCTAGTGATG TGTCTGTCCA CACTATCCTT TCCCCTTGGA AGACTGTTTT TGATGCTGCA AGCTGGGAGC AGCTTATGCG TCGTTACATA GTTCCTAAAT TACAGCTGGC TTTGCAAGAG TTCCAGATAA ACCCAGCAGA CCAGAATTTA GACCAGTTCA ATTTGGTTAT GGGGTGGGTA TCTTCAGTAC CCATACATCT AATGACTGAT CTGATGGAGA GATTCTTTTT CCCCAAGTGG CTGGATGTTT TATATCACTG GCTGTGTTCA GAACCAAAGT TCGATGAGAT AATGAAGTGG TATTTGGGTT GGAAAGGATC ATTCCCACAT GAGCTTTCCG CAAACAGGGG GATCGAAATC CAGTTCAAGC GTGGTCTAGA TATGGCGAGG GAAGCAGTTG AACGGATGGA AATGTCTCAG CCAGGGGCAA GGGAGAACAT AAGCTACCAC AAGGCACAAG AGCAGAGGGA GTCTGAGGGT CGTGCTAAGG TCCAGGCTCA GGTGGATGAC CCCGAGGAGC TGAGTTTTAA AGAAGCAGTA GAATTATTTG CGCAGGAGAA GGAGTTGCTG TTGAAACCTA AACCTCATAG AATGCACAAC GGACTTCAGA TCTATAGGTT CGGGAACGTG AGCGTGTTAC TAGACTCAGC AAATTCTAAG TTGTTGGCCC AGGATGCAGG AGGTTGGTTT CCTGTTGATC TTGACAGCTT GCTTAAGATG CACTATAGTG CCGTTGCTGG AAAACAATGA AACATTACCC CTAGGAAGGA AGTAAGAAGA AGAATGGATA AATGTTTTGG AAGCATCGAC ATTTCCCTGC AGATGGACCT GAGATAGAGA AGTCAATATG TTTCAACTTT TAGAGATTTT ACCTGTTTTT TCTAGTGGTT GCATCTGAGC AAACCTTGTG GATATATATT GAGCTTTACT ATTTTGTTTC CCTGCGGTGG CACGTTACAA TGCCTCTTGT ATCTCTCGTT CTTTATCTAT AAATAAACAA TATAAGTTGG TCGAATTTAA CATCTTCAAG CCCATGATTG AGATTGTAAA GAGCTCT 
Length2077
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19623286.. 19626081
Download Sequence
A.thaliana
AGI-codeAT2G42330.1
DescriptionGC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.08276 Ahg355578
9 Ahg344161 Plant Tudor-like protein
17.2337 Ahg490906
17.8885 Ahg347259 U5 small nuclear ribonucleoprotein helicase, putative
20.7846 Ahg473745
21.1187 Ahg943129 Copper amine oxidase family protein
23.6854 Ahg480185 Ubiquitin-like superfamily protein
25.0799 Ahg474787 Protein of unknown function (DUF1399)
26.2679 Ahg909961
27.7489 Ahg490488 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression