| Annotation |
|---|
| Description | jgi|Araly1|483352|fgenesh2_kg.4__2412__AT2G42580.1 |
| Sequence |
CTGGAGACAG TACTTGTTTC TGCCCGGCGT GACTTCTTTG AGAAGAAGAA AGAAGAAGCT GAGTCTCGTT AGATTCAGCT TACGAGGAAG TGATGTCTCA TTCTAGAAGA CTTTCGTTGG AACCTGCTAT AGATTCAATC ACAGGTCGAT TTCGTGATTT ACAGAGAAAC GATGACGTCA ACAAACCTGA TTTTCGAGAA CTCGATCTGG GTTCTCCTGT TTCTACCTTA ATGCCACGTG GCTCTGCTTC TTCTTCCGCC GCTGCGACTC CTACGAGCAG CTCTGGTTCT TCAGGCTCTG CTTCTGGTAA ACCGTCGGTG AGTTCTCAGA TGGGTAAGCG GTTAGAGAAT GGTTACAGGA GTCACTCCGG TGAGCTTTCT AGCCCCGGAT CCGGAATGCC GACGACCCGG AATCTTAAAC CGGGTCATAG AAGATCTTCC TCTACTGGAA CGCCGTTGAT CTTCTCTGGC TCTAGCTTTA CCTCAGCAAC GAGTCACACC TCGCCGCAAG GAGGTGGTAG CGGTGCTACG TCTGCAGTGT CGCCGAGTCC CGGCGTTTTA CCGGCGGGAA ACATTTGTCC CTCGGGTCGG ATCTTGAAAA CCGGAATGGC GTCTCGGACC TCAAGTAGGA CTGAGACTCT GTGCACAGGA ACTGGAAATT ACGGACATGG AAACGTTGTA CGCAGTGGCG CAGGAGGAAG CAGCGGAAAG ACGGTGAGAG CGGCGGAGAA CGGCGAAAAT CCGGAGGAGT TGAAGAGAAT GGGGAATGAT ATGTATAGGA GAGGGAATTT CTCTGAAGCT CTGTCGCTTT ACGACAGAGC AATTTCGATT TCACCGGAAA ATGCAGCTTA CAGAAGCAAC CGTGCGGCAG CGTTAACGGC GTTAAGACGG TTAGGAGAAG CCGTTAAAGA ATGTCTTGAA GCTGTTAGGC TTGATCCTTC TTACTCCAGA GCTCACCAAA GACTTGCTTC TCTATATCTC AGATTGGGAG AAGCTGAGAA TGCAAGACGT CATATTTGTT TTTCCGGGCA ATGTCCGGAT CAAGCTGATC TCCAACGGCT GCAGACACTG GAGAAGCATC TCCGGCGATG CTGGGAGGCT CGGAAGATTG GAGATTGGAA AACCGCGATT AAGGAAACCG ATGCAGCCAT TGCAAACGGC GCTGATTCGT CTCCTCAGCT TGTAGCTTGT AAAGCAGAAG CCTTTTTGCG TCTTAACCAA ATAGAGGATT CAGATTTTTG TCTATCTTGC ATTCCAAGAT TGGATCATCA TTACCATTCT CAGCCGCAGG CGAAACTCTT TGGTATGGTA GTTGAAGCTT ATGTGCTCTG TATCCAATCT CAAGTTGATA TGGCATTAGG AAGATTTGAG AATGCGGTTG TAAAGGCAGA GAGAGCTGCA ATGCTCGATC AGACCAATCC TGAGGTAGCA TCAGTTTTAA ACAATGTGAA GATGGTTGTG CGGGCACGTA CTCGTGGTAA TGAGTTGTTT AGTTCGGGGA GATTCTTGGA TGCGAGTGTT GCTTATGGAG ACGGTCTCAA GCACGATGAA TCCAATTCGG TTTTGTACTG CAACAGAGCA GCGTGTTGGT ATAAGCTCGG TTTGTGGGAG AAATCTGTTG AAGATTGTAA CCATGCGCTC AAAATCCAGC CTAGTTACAT CAAGGCACTT CTACGAAGGG CTGCTTCTTA TGGAAAGCTT GGTCGGTGGG AGGATGCAGT CAAAGATTAT GAGTTCTTGA GAAGGGAACT TCCAGGAGAC AGCGAAGTTG CAGAGTCTCT AGAGAGAGCG AAAACCGTGC TAATGAACAG AAGCCAAGAA TCTAAAAGCC TAGGTTTCAA TAATGAAGTT GAAGCGGTTT CGACTTTGGA TAAGTTCAAG AGCTCGGTAG CACTTCCCGG TGTCACTGTA TTTCATTTCA AATCATCATC AAACCGACAA TGCGAAGAAA TTTCTCCTTT CATCAACACT TTATGTCTCC GGTATCCATT AGTACATTTC TTTAAGGTGG ATGTGGAGGA GAGCATGGCA TTGGCGAAAG CAGAGAGTAT CAGGAAAGTT CCTACATTCA AGATGTACAA GAATGGAGAT AAAGTGAAGG AGATGGTTTG TCCGAGCCAT CAGTTTCTAG AGGACTCTAT AAAGCATTTC CTCTTATAAC TGAAAAAGCC CTATCATCGT TCTCTGCTTC CCTATGATTC GATCCGAAGA GCCTATTCAA AGACTCAGAA AGTAATCTTT GTTAAAGATG GGAAAGAGCT ATTCTGTCAA ATTCAACAAA CTATTCATTC TTTCTTCTTT TTTTCGATTC TAATTCTTTT TTTTTGAAGT TTCACTCTGC TTGCTTTGGC TATATTACAT ATTAGTAAAT GTTCGCAAGG ATTCAAGAAA TACAAGCTTC ATTATCTATT |
| Length | 2410 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19792230.. 19795198 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G42580.1 |
| Description | tetratricopetide-repeat thioredoxin-like 3 |
| TAIR curator summary | Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. |
| Alias | [TTL3][VIT][tetratricopetide-repeat thioredoxin-like 3][VHI-INTERACTING TPR CONTAINING PROTEIN] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg333105 | 3-ketoacyl-CoA synthase 20 |
| 5.19615 |
Ahg918479 | SKU5 similar 17 |
| 5.38516 |
Ahg944085 | GRAS family transcription factor |
| 12.1244 |
Ahg478905 | Plant protein of unknown function (DUF641) |
| 12.4499 |
Ahg895886 | Protein kinase superfamily protein |
| 15.8114 |
Ahg343376 | |
| 16.5227 |
Ahg471206 | alpha/beta-Hydrolases superfamily protein |
| 16.9706 |
Ahg488159 | Major facilitator superfamily protein |
| 18.7083 |
Ahg927692 | longifolia2 |
| 18.8149 |
Ahg928231 | Plant protein of unknown function (DUF828) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|