| Annotation |
|---|
| Description | jgi|Araly1|928231|scaffold_300688.1 |
| Sequence |
ATAGGTATAA TTACCTTCAG ATGTCTAAGA ACTCAAACCT TGAAGAAAAC GGAGGAGCAA AGCCAATCTG TGAAGCTTTG AAGAGATTCA AAAGGTCGAG ACTTGTGTTC GAGCCGTCTT TAGGAGTGTT GGGGTTCTTT TTGGTTGGGG TGTGTTTGGT TTGCAGTTTT TTCTTATTTG ATTACAGAAA CGTAGCTAGA AGCTATGGCC TTTCGGATAA ATCAGACAGA TTCGTTTGGC TCAAGCTTGA CAACAACATC AGCAGCAACA CTAGTAGTAA TAGTTCAAAG AGAGTTGGAT TTCTGGAAGA GAGTGGAAGT GGGTGTGATG TGTTCGATGG AGATTGGATT TGGGACGAGT CTTATCCATT GTATCAATCC AAAGATTGTA GATTTCTCGA TGAAGGGTTT AGGTGTAGTG ACTTTGGAAG GTCTGATTTG TTCTATACTC AGTGGCGATG GCAACCTAGA CACTGCAATT TGCCCAGATT TGATGCTAAA CTGATGCTGG AGAAACTCCG GGACAAGCGG CTAGTGTTTG TTGGAGATTC AATAGGAAGA AACCAGTGGG AGTCTCTTCT GTGTCTACTA TCTTCTGCAG TCAAGAACGA GAGCTTAATT TATGAAATAA ATGGAAGTCC CATCACAAAG CACAAAGGGT TCTTGGTGTT CAAATTTGAG GAGTACAATT GCACTGTGGA GTACTACAGA TCACCATTTC TGGTTCCTCA AAGCAGACCA CCGATTGGAT CACCCCAAAA GGTTAAGACA ACTTTGAAAC TGGACACTAT GGATTGGACT TCAAGCAAAT GGAGAGATGC AAACGTTTTA GTGCTCAATA CTGGTCATTG GTGGAACGAG GGAAAAACTA CTAGAACGGG ATGTTACTTT CAAGAAGGAG AAGAAGTGAA ATTGAAGATG AATGTAGATG ATGCTTATAA GCGAGCTCTG AATACCGTTG TGAAATGGAT ACATACCGAG GTCGATTCAA ACAAAACTCA AGTCTTCTTT CGCACATTCG CTCCCGTGCA TTTCAGGGGA GGAGATTGGA AAACAGGAGG AACATGTCAC ATGGAAACAT TACCAGAGAT TGGAACCTCA TTGGCTTCAT CAGAGACATG GGAACAGTCA AAGATCCTCA GAGATGTGTT GTCACATTAC TCGAACAGAT CAGAGACTGT TAAAATGAAA GTGTTGAACA TAACGGCAAT GGCTGCTCAA AGAAAAGACG GCCACCCATC GCTCTACTAT CTTGGTCCGC TTAGTCCTGC ACCGCTGCAT CGCCAAGACT GTAGCCACTG GTGCCTTCCC GGTGTTCCAG ACACGTGGAA CGAGGTCTTC TATGCATTAT TTATGAAACA AGAAGCTCCT TCTTCTTCTA AAAGTGTTGA AGAAGCGAAT ACTACAGGAA TGTCATGACG CTGGACTGAA CAAGGAAA |
| Length | 1438 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 2301399.. 2304067 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT3G06080.2 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL10][TRICHOME BIREFRINGENCE-LIKE 10] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg495894 | cyclic nucleotide gated channel 5 |
| 8.48528 |
Ahg494434 | RNI-like superfamily protein |
| 10.6301 |
Ahg484057 | Auxin efflux carrier family protein |
| 11.0905 |
Ahg336125 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 15.9687 |
Ahg471394 | A20/AN1-like zinc finger family protein |
| 17.4642 |
Ahg317378 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 18.735 |
Ahg911676 | Galactose oxidase/kelch repeat superfamily protein |
| 18.8149 |
Ahg483352 | tetratricopetide-repeat thioredoxin-like 3 |
| 20.0499 |
Ahg895886 | Protein kinase superfamily protein |
| 20.1494 |
Ahg941391 | CHY-type/CTCHY-type/RING-type Zinc finger protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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