Detail



ID : Ahg927692

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927692|scaffold_300149.1
Sequence
GTTAAGTAGG AGACGAAGAT ATGTCTGCAA AACTTCTGTA TAACTTGTCA GATGAGAATC CAAATCTGAA TAAACAGTTT GGATGCATGA ATGGGATCTT TCAAGTCTTT TACCGGCAAC ATTGTCCGGC GACACCAGTC ACCGTCTCCG GCGATGTAGA CAAGTCTTTG CCTCCAGGGG AAAGAAGAGG TAGCGTCGGT GAAATCAACA TGGAAAGTGA TAAAGAAACG GAGAGGAGTA GTACCAAGAA GAAGAAGTCT GCAGCAAAGG AGAAGCATAG AGTCTCTTCT GAATCCTCTT CGAGGCCTTC ATTTTCGTCT TCTCCACGCT CCTCGAGCTT CTCGTCTGCA GAAGTCAGTA CCACAGCTTC TCAATTTGAC CCGCCTGGTG AGAACCTGAT CAGAGAACAT CCCAATGGTG GCCTGATGAT GCCGTATGAT CTTAAGGAGC TTGTGAAAGG CTCTATTAAT AGAGATATGA GAACTAGAGG CGAAGAAGCT GCCTTCACTC AGCAGCAGCA GCCCAATTCA GCTCGAACTA GCATGTTGCT TCTCAAAGAA TCATCATTGC GTTCACCATA TCGGAGTTCT AATGAGTGGA ATGAAGGAAG AGGAATGGCT ATGAAGTTTA AGGAAAGTCA CCGGCTTTCT TATGATGAGA GGGAGATAAG AAACAACGGG TTCAAGGTGG GTTCGAAGTT GAAAGAGACA CCGAGGTTGT CGTTGGATAG TAGATCGAAT TCCTTCAGGA GTCCGAGAGC AGATGCTGCG AGATCGAGTT GTCCAGAGGA ACCCGCAACA ATGAATCACA GGAGATCAAG TTCGAGTGTT GTTGCTAAAT TGATGGGTCT TGAAGTCATT GCAGACAATT CTGATACTGA ACAGAGAAGA GAGAACCGGT TTTGTGACTC TCCAAGGCCA ATGTCCAGAG TGGAACCAGC TCTACAGAGA TCTAGAAGCG TAGATTCGAT CAAGAGGATA CCTGCTTCAG CTGCTTCTAA GTTTCCAATG GAACCAGCTC CATGGAAGCA AATGAAAGCA GGCGACTCTG CACTGACTGT ATATGGTGAA ATTCAGAAGC GACTTACACA GTTGGAGTTC AAAAAGTCGG GAAAAGATCT CAGAGCTCTT AAGCAAATAC TTGAGGCTAT GGAGAAAACA CAGCAGTTGA TAGATGAAAG CAGAGATGAC AGTACTCTGA ATACAACCAC TCTTTTGCAG AGAACTCACC AGCTAGTTCC AGCTGCAACA AGTCCTGCCA GGAACTTCAA ATCTTCATCG ATCGTTGTTA TGAAATCCGC GGCTCCAGTT TCCACCTCTC CGCTACCACA GAATGTCACC TTACCAAATG TCAAGGTTGG AAACTCTAGA CAAACCCGGA AAGTCACCTC GGGGAAGCAG AACGCGATGG ATTTAACCCC AAGGCCAGGC CTTTACAAGG GCCAACTCGA TTCCACAAAG AGCAATAGCC CCAAAACATT ACGGTCGAGG CAAGCTTCGG CTGCGGATGC TGGTTCCATG ATCAAGTCAG GTAGAAGCCA ACAGCACAGT GTCAGCCCAA GAACGCAGCC AAAAAAGCTT GGGTTCGAGA AACAGTCTCG ACCCACAACT CCAAAATCAG AGCCAGGCAA AAGGCAACTC GGAAAGCAGC AAACAGAGGT AGCCTCCCCG AGTAGAAAAC AGCTGATAAA ACCTCACAGT ACTCTTCAGC AACCTGATGA CAGATTGAGC GATGCAAGCA GCGACTTGAG GAGTCTAAGA TCTGACAGCA ACATAAGCTT GGGATCGAAT GTTGACATCG AGGTTACAAG CAGACATAGG CTGCAGAGGA ACTGTGACTT CCCAGAGCAG CACACCCCAA AACAAAGGAG TCCGGACTTT GGAATCAAAC AAGACAGACC ATCCCTAAAA CCTCTGAAAG TTACCATTGA ACAACCGAGC CCTGTTTCAG TTCTTGATGC AGTCTTCGAC GAAGAGGATT CACCGTCCCC TGTGAGGAAG ATATCCCTTA GTTTTAAAGA GGAGGATGCT TTACGTTCTG AAGAATCTGA GTGGATAAAC AAGCCTACCA GCTTCTGCAG ATCCATACTA TTTCCTCACA GTAACCGGGA CCCAACAAAG CGAAGTTCTG ATCTTTTTGA ATGCTTCCCT GAAGAAGGTG CAGACTTCAA AGGCGGCAAC CACAAGTACA TCTTAGAGAT CTTGTTGGCC TCAGGGATTC TAAGAGATCT TGAATACAGC ATGATAAGCT TTCAGCTGCA TCAAACGCGC CTCCCAATCA ACCCTGGACT GTTCTTTATC CTAGAACAGA ATAAGGCCAG CAATGTGACT CTACCGGACA ACAAACACAG AGGCAGAGGA TTCAGACAAC AGCAGACAAA TCCGACAGAG AAAATCAGGA GAAAACTCGT CTTCGACACC ATTAATGAGA TTTTAGCTCG GAAGTTCACT GCAGAAGGCT GTATCAAACC ACGTTTAACC GCAAATCCAC TAAAAAAAGT GGAGAAAATA TCAAAAGAGG AGCAACTTTT GCAGACTCTG TGTTCAGAGA TTGATAGGTT ACAACAAAAC AACTCAAACT GTATCTTGGA AGACGACGAG GAAGACATCA TATGGGAGGA CCTGCAAAGT CAAGGCATGA ACTTGAAGGA GTTTGAAGGA GAGACTCCAG GAATTGTGTT AGATATTGAG AGAATGATTT TCAGAGACTT GGTTAATGAA GTTTGCTTCT GCTAATTTTT TATGGTTATC ACTTAG 
Length2756
Protein Sequence
Protein Residue
Map Locationscaffold_3: 450562.. 453797
Download Sequence
A.thaliana
AGI-codeAT3G02170.1
Descriptionlongifolia2
TAIR curator summaryEncodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function.
Alias[LNG2][TRM1][LONGIFOLIA2][TON1 Recruiting Motif 1]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg888769 pectin methylesterase 44
6.32456 Ahg475717 transmembrane kinase 1
7.74597 Ahg926133 B-box type zinc finger protein with CCT domain
8.60233 Ahg470791 Leucine-rich repeat transmembrane protein kinase
10.0995 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
10.9545 Ahg895886 Protein kinase superfamily protein
14.3875 Ahg471170 xyloglucan:xyloglucosyl transferase 33
18.7083 Ahg483352 tetratricopetide-repeat thioredoxin-like 3
18.7617 Ahg473497 GT-2-like 1
20.6398 Ahg476393 germin-like protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression