| Annotation |
|---|
| Description | jgi|Araly1|483403|fgenesh2_kg.4__2463__AT2G43018.1 |
| Sequence |
TTTTTTTGTT TTCTCTCTCT AGAAGTCTCT GTTTTCATCT TTCTCTCTCT AGCCTTTGCT CTTCTTTCTC GTTTCTGGCG TTTCTGGGAA TTTTGATCTA TTTTGCCCCC ATTGTTCTCT TGAAGTACGC ATCCGATATC GCCGATCGTC GTAGATCTGC GTTGATATTA GCCGGCTGAG TAAAAGCAGA GTGAACAAAA ACCAAAAACA AAGGGGGTTT AAAAATCCTG AAGAAAAGAG AAATCGCATG AATTTGTTTG GAAGCCTGAT TTTTTCATCT TCGATTTCGA GCCACTTCAC GACTTGTCTT CTCATATTTA TTCTTCATTT CTCTCCTCAG CTTAATTGTA ATAATAATAA TAATAATAGT AATCGTAATT CCAATAATCT CGAGAGTAAT CGTTTGATCA ATTGAATAAA TCATGGAGTC TAGGAAAAAC TCTGATCGTC AAATGCGTAG AGCTAATTGC TTTTCAGCTG GTGAGAGGAT GAAGACAAGG TCTCCGTCCG TGATTGTGAT CGGAGGTGGT TTTGGTGGGA TTTCAGCTGC TCGCACTCTT CAAGATGCTT CCTTTCAGGT TATGGTACTG GAGTCCCGTG ACAGAATTGG TGGACGAGTT CACACTGATT ACTCATTTGG TTTTCCTGTT GATCTTGGTG CATCATGGCT GCATGGAGTA TGCAAAGAGA ATCCTCTGGC ACCAGTAATT GGAAGACTGG GACTGCCCTT GTATCGTACT AGCGGTGACA ATTCTGTCCT GTATGATCAT GATCTCGAGA GCTATGCTCT GTTTGATATG GATGGCAACC AAGTTCCTCA AGAGTTGGTA ACTCAGATTG GCGTAACTTT TGAGCGTATT TTGGAAGAGA TCAATAAAGT CAGGGATGAG CAGGATGCAG ACATTTCAAT TTCTCAGGCT TTCTCAATTG TCTTTGCTAG GAAACCCGAG CTGAGGTTAG AGGGGCTTGC ACACAACGTA CTTCAATGGT ATGTATGCCG CATGGAAGGA TGGTTTGCTG CAGATGCTGA AACCATCTCT GCAAAGTGTT GGGACCAGGA GGAATTGCTG CCTGGTGGAC ACGGTCTTAT GGTTAGAGGG TATCGTCCTG TCATCAACAC TCTGGCGAAA GGTCTTGATA TCCGAGTAGG CCACAGGGTT ACTAAGATTG TCAGGCGTTA CAATGGGGTG AAGGTAACGA CAGAAAACGG GGAAACATTT GTTGCGGATG CTGCAGTCAT TGCGGTTCCT CTCGGAGTCT TAAAATCTGG AACCATAAAG TTCGAACCAA AGCTACCTGA GTGGAAACAA GAAGCAATCA ACGACCTAGG AGTAGGTATC GAGAACAAGA TCATACTACA TTTTGAGAAA GTCTTCTGGC CGAAAGTAGA GTTTCTAGGA GTGGTAGCTG AAACCTCCTA CGGTTGCAGT TATTTTTTGA ACCTGCACAA GGCCACAGGT CATCCAGTTC TGGTTTACAT GCCGGCTGGT CAGCTCGCCA AAGACATTGA GAAAATGTCT GATGAAGCAG CTGCAAATTT TGCCGTCTTG CAACTCCAGA GAATTCTTCC CGATGCATTG CCTCCAGTTC AATATCTTGT ATCGAGGTGG GGATCGGATG TGAATTCAAT GGGATCTTAT AGCTATGATA TCGTGGGGAA ACCTCATGAG CTCTACGAGA GGCTTAGGGT TCCAGTGGAT AACTTATTCT TTGCCGGTGA AGCGACAAGC TCGAGCTTCC CGGGCTCGGT TCACGGCGCT TATTCAACTG GATTGATGGC AGCTGAAGAA TGTAGGATGC GAGTTTTGGA GCGGTATGGT GAGTTGGATC TGTTCCAGCC TGTGATGGGC GAGGAAGGAC CTGCCTCTGT TCCTCTTCTT ATATCTCGTC TCTAAACTCC ATCAGTTATC GTTTACTTAC AAAGAACCTC AAGTGATGCT GGTCTTAATT TGAAACTAAA GCTATTCTCG TATCGGATCG GTTAA |
| Length | 1985 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19999095.. 20002181 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G43018.1 |
| Description | conserved peptide upstream open reading frame 17 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF17 represents a conserved upstream opening reading frame relative to major ORF AT2G43020.1 |
| Alias | [CPuORF17][conserved peptide upstream open reading frame 17] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg470149 | Integrase-type DNA-binding superfamily protein |
| 6.16441 |
Ahg473472 | UDP-Glycosyltransferase superfamily protein |
| 6.40312 |
Ahg475149 | glucose-6-phosphate/phosphate translocator 2 |
| 8.30662 |
Ahg474823 | production of anthocyanin pigment 1 |
| 9.48683 |
Ahg915315 | nudix hydrolase homolog 8 |
| 14.8324 |
Ahg488016 | N-MYC downregulated-like 2 |
| 14.8324 |
Ahg494620 | RmlC-like cupins superfamily protein |
| 16.3095 |
Ahg355933 | |
| 16.9115 |
Ahg481765 | related to AP2.7 |
| 21.7945 |
Ahg483029 | HAD superfamily, subfamily IIIB acid phosphatase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|