Detail



ID : Ahg473472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473472|fgenesh2_kg.1__3426__AT1G32900.1
Sequence
AACAACTATA ACAACGACAC GTGTCACTCG TGTCAGTCCA AGCCTCCACT CTTCTTCTCT ACTACATAAC GGACCATTCT TCTCCTCTGC TCTCTTCACT TTCTCATCTC CTTTATTAGC TCTATTTTCC TCAGTCGCCG TGTGAGTTTT TCAAGGTCTC TTTCATAATG GCAACTGTGA CTGTTTCTTC ACACTTTGTG TCAAGAACTT CACTTTTCAA CAATCATGGA GCTTCTTCAT GCTCTGATCT GTCTCAGATT ACCTTAAAAG GTCAATCCTT GACTCACTGT GGGTTAAGGT CTTTCAACAT GGTGGATAAG CTTCAGAGGA GATCTCAAGC TAAACCTGTT TCTGCTAAAT CCTCAAAGGG GTCTTCTAAA GTTAAGACTG GTGGTAAGAT TGTGTGTGAG AAAGGGATGT CTGTGATCTT TATTGGAGCT GAAGTTGGTC CATGGAGTAA AACTGGTGGT CTTGGTGATG TCCTCGGTGG TCTACCTCCA GCTCTTGCTG CTAGAGGCCA CCGTGTGATG ACAATTTGTC CTCGGTATGA CCAATATAAA GATGCTTGGG ACACTTGTGT TGTGGTTCAG ATCAAAGTTG GGGATAAAGT TGAGAATGTT CGTTTCTTTC ATTGCTATAA ACGAGGAGTT GATCGTGTCT TTGTTGACCA TCCAATCTTT CTTGCTAAGG TTGTGGGCAA AACAGGATCC AAAATCTATG GTCCTATAAC TGGAGTAGAC TACAATGACA ATCAACTCCG GTTCAGTTTG TTGTGTCAGG CTGCTCTTGA GGCACCACAG GTTCTGAACC TGAATAGCAG CAAGTATTTC TCTGGACCAT ATGGTGAAGA TGTAGTCTTT GTTGCCAATG ACTGGCACAC TGCTCTCCTT CCATGTTACC TCAAATCTAT GTATCAATCC CGCGGAGTCT ACATGGATGC AAAGGTTGTC TTCTGCATTC ACAACATAGC CTACCAAGGA AGATTTTCCT TTGATGACTA TTCTCTTCTC AACTTGCCCA TCAGCTTTAA AAGTTCTTTT GACTTCATGG ACGGGTATGA AAAGCCCGTA AAAGGACGGA AAATTAATTG GATGAAGGCT GCAATTCTGG AAGCTGACCG TGTCTTAACA GTTAGTCCAT ACTACGCTCA AGAACTCATC TCTGGAGTCG ATAGAGGCGT GGAGTTGCAT ACATATCTTC GAATGAAAAC AGTTTCCGGA ATTATTAATG GAATGGATGT TCAAGAATGG AACCCGTCTA CTGACAAATA CATCGATATT AAATACGATA TTACCACTGT TACAGATGCT AAACCATTGA TCAAAGAAGC ACTTCAGGCT GCTGTTGGAC TTCCAGTCGA CAGGGATGTC CCGGTTATCG GTTTCATAGG GAGATTGGAG GAGCAGAAGG GCTCTGATAT TCTAGTGGAA GCTATTTCCA AGTTCATGGG GCTCAATGTT CAGATGGTTA TCCTTGGGAC TGGTAAGAAG AAGATGGAGG CTCAGATTCT GGAACTAGAA GAGAAATTCC CAGGGAAGGC GGTTGGAGTG GCGAAATTCA ACGTGCCATT GGCTCATATG ATCACTGCTG GAGCTGACTT CATCATTGTC CCGAGCAGGT TTGAGCCGTG TGGTCTCATT CAGCTACACG CCATGAGATA TGGAACCGTC CCTATTGTGG CATCTACTGG TGGGCTTGTG GACACTGTGA AAGATGGCTA CACAGGTTTC CACATTGGAA GATTCAACGT CAAGTGTGAA GTTGTGGATC CAGATGATGT GATTGCAACA GCAAAGGCTG TGACAAGAGC CGTTGCAGTA TATGGAACAT CCGCAATGAA AGAGATGGTC AAGAACTGCA TGGACCAAGA CTTCTCCTGG AAGGGACCTG CGAGGTTGTG GGAGAAGGTA TTATCGTCCC TTAATGTGGC GGGAAGTGAA GCCGGAATCG AGGGTGAAGA GATAGCTCCT CTGGCGAAGG AGAACGTAGC GACGCCCTGA GAATGTGATT TTGTTTGTGT CAAAGTGGTT GAAGAAAGCG TTGGGAAGTT AGGAGTAGGA AAGGTCTAAG GAAAGGTAAT GTATATGGGA AATGTTA 
Length2097
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14380656.. 14383946
Download Sequence
A.thaliana
AGI-codeAT1G32900.1
DescriptionUDP-Glycosyltransferase superfamily protein
TAIR curator summary
Alias[GBSS1][granule bound starch synthase 1]
Gene coexpression
MR
MR Locus Description
1 Ahg488924 Tetratricopeptide repeat (TPR)-like superfamily protein
2.44949 Ahg490693 Glucose-1-phosphate adenylyltransferase family protein
3.4641 Ahg494620 RmlC-like cupins superfamily protein
5.65685 Ahg939752 starch branching enzyme 2.2
6.16441 Ahg483403 conserved peptide upstream open reading frame 17
6.63325 Ahg480999 MATE efflux family protein
7.14143 Ahg493370 beta-amylase 5
7.54983 Ahg490234 Outer arm dynein light chain 1 protein
8.3666 Ahg481882 Tetratricopeptide repeat (TPR)-like superfamily protein
8.48528 Ahg920010 glyoxalase I homolog
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression