Detail



ID : Ahg483732

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483732|fgenesh2_kg.4__2792__AT2G45920.1
Sequence
GGTTGACTTC GTATGCATGT TATAACATAA GAAAATGTTC TTGTTTGTTG ATTGCTCCCT CTGTTAAATC AATCATCTCT TTTCTTGTAT TGCAAAAAAT TTATGTTTGT TCTTGTTCAT TCTCTTGAGT GAATTAGAGG AATGTTTTGA GTGTCTCATA TGGAGTGTGT TGGAGAAAGG AGCTTCGATC CAAGCAAAGG GGAAAAGTGT TGGCTTCATG AGGCTTCGAT GCAGCGTTAA ACGCTGAATC TAGGCCAATC AAGAGGGTGA TAGAGAGAGA TGATGGGCAA ACCAGGTTCG CTGCAGCTGC TAATGGATGA GAAGATATAT GTTGCAGTGG GGAGTGACTT GGGGAACAAG TCCACTCTAG TTTGGGCGAT ACAGAACACT GGAGGTAAGG AGTTCTGTAT CGTCCATGTT CACCAGCCGC TCTACAGAAA AGACAAGGAA AAGGCACAAA AGATCCTGGA CAAGTACCTA CAAACATGCA GGCAGATGCA GGTCTGTGCT GAGACGATAC ACATCGAAAT GGACTCGGTA GAGGAAGGTA TCATCCAATT GATCTCAGAG CGCAACGTTA AGAAGCTCGT CATGGGAGCT GCATCAGACA GACACTATTC AATGAGGATG GCAGATCTGT TGTCCACGAA AGCCATTTAC ATTCGTCAAG AAGTGCCTGC TACTTGTTGT ATATGGTTTA CTTGCAAAGG ATACCTGGTA TATAAAAGGG AAGCTATCAT GGGTAACACC TCTCTAGAGT ATGCATCTAC AAGTTCTGAT CAAGATTCAG TCCGTTCACG AGGATCTGTT ATACCTTCGG GCCAATACAC GATATCTAGA GGAAATGGAA ATGTGTATCA ATTAGCTGTC TTTGAAGCTG AGAAATCGAA AAAAGAAGCA AGCTTGGAGG CTTTCAAGCA TCAAGAAGTT GAAAAAGAGA AAAATGAAGC AATCAAAAGG GCTAAAGAAT GGGAAAATGC CTATTTCGAG GAGTTGAAAG AAAGGAAAGA AACAGAGATG GAGCTGAAGA AAGTGAGAGA AAAACTCGAA AATATGAGGT ATATATCTGA GAACCGAATA ACCGAGTCTT ATATGCTGGT ACAAAAGCTG CAAGACAAGT ATAACTTGGC AACGAAAGTG TTGAGAAAAG CCAAGGAAGA ACGGGATAGA TTGATAAAAG GACGCGACAT AGCAATTATA GAAGTAGAGG AGCTAAGAAA AATCCATGAG AAGGTCTCTC GATCTGATGA GCACCGTGAA GCTCCTCAGT ACTTCATCTG TCCCATTTCA CTGGAAGTGA TGAAGGATCC ACAACTAGCA TCAGATGGAT TTACATATGA AGCAAAAGCC ATAAGCACAT GGCTTCAGAG AGGACATGAG ACTTCCCCAA TGACAAACAA GAAGCTTCTT CATACAAAGT TAGTTCCAAA TCTTGCTCTT CGATCTGCAA TCCAGGAATG GCTTCACGCT TCATCCTCTT CCAGAAAGTG AATAGAAATA AAATCACACT AAAATATATT CTTAAGCATT TGCTTCAACG GACTCGTCTC TGCTTGTAAT GTATATTAAA CCGATGTAAT TTTTTTCTCC ATGTTTTATT TATTTTCTTA TTAATACAAT CTGACCATAT GCATTACGTT GAAAACAGCT AATTAACGAA ATAAAATTTG TATAGATA 
Length1678
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21191873.. 21194103
Download Sequence
A.thaliana
AGI-codeAT2G45920.1
DescriptionU-box domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.6155 Ahg476076 NAC-like, activated by AP3/PI
21.8174 Ahg477599 non-specific phospholipase C5
25.0998 Ahg494664 phosphate transporter 1;1
26.8328 Ahg472890
27.9643 Ahg922121 Major facilitator superfamily protein
28.3019 Ahg494895 Glutamate receptor family protein
29.7993 Ahg929238
35.7771 Ahg910311 alpha/beta-Hydrolases superfamily protein
38.6135 Ahg317234 non-specific phospholipase C4
48.0104 Ahg476641 thaumatin-like protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression