| Annotation |
|---|
| Description | jgi|Araly1|483789|fgenesh2_kg.4__2849__AT2G46370.2 |
| Sequence |
GACTTTCCAA ATTCACTCAA CTTTCTCTCT CACTCCTTAG TACTCTCCCT CTCTCTATCT TTCTCACTCC TTAATCTAGC TAATTTAGGA TGTTGGAGAA GGTTGAAACT TTCGACATGA CCAGAGTAAT TGATGAATTC GATGATATGA CTAGAAACGC TGATCAAGTC CAAAAACAAA CCTTGAAAGA TATTCTTCTC AAGAACAAAT CCGCCATTTA CTTACAAAAC TGTGGACTCA GTGGAAACGC AACTGACTCA GAAGAAGCTT TCAAAGCTAT GGTTCCATTA GTCACTGATG TTGAATTAGA GCCTTACATC AAAAGAATGG TCGATGGTGA CACTTCACCT ATTCTCACTG GTCACCCTGT TCCTGCCATT TCCTTAAGCT CTGGAACTAG TCAAGGCCGT CCAAAGTTTA TTCCTTTCAC TGATGAATTA ATGGAGAACA CATTACAACT GTTTCGCACT GCTTTTGCCT TCAGAAACAG AGATTTTCCT ATTGATGACA ATGGGAGAGC TTTGCAGTTT ATCTTCGGCA GCAAGCAGTA CATATCAACG GGAGGTGTCC CGGTTGGAAC CGCAACCACA AACGTGTACC GCAACCCTAA CTTCAAAGCC GGGATGAAAT CTATAACGTC TCCTTCCTGT AGTCCTGATG AAGTTGTCTT TAGTCCTGAT GTCCATCAAG CCTTGTATTG CCATCTCTTA TCCGGAATTC TCTTCAGAGA TCAAGTTCAA TACGTCTTTG CCGTCTTTGC TCACGGTCTA GTTCACGCGT TTAGAACCTT TGAACAGGTT TGGGAAGAGA TTGTTACCGA TATTAAAGAT GGTGTCTTAA GCAACCGTAT TACTGTTCCA TCAGTCCGTA CTGCGATGTC GAAGCTGCTC ACACCTAACC CTGAGCTAGC TGAGACAATC CGCTCCAAAT GTATGAGTTT GAGCAACTGG TTCGGATTGA TTCCCGCGCT CTTCCCGAAT GCAAAATATG TTTACGGGAT CATGACTGGC TCGATGGAGC CGTATGTGCC AAAGCTGAGA CATTATGCGG GCGATCTACC TCTTGTGAGT CATGACTACG GTAGCTCGGA AGGATGGATT GCTGCTAATG TTACCCCGAA ACTGTCTCCA GAGGAAGCTA CATTTGCGGT GATTCCAAAT CTCGGTTATT TCGAGTTTCT CCCTGTATCT GAAACAGGGG AAGGAGAGGA GAAACCGGTT GGTTTAACTG AAGTCAAGAT CGGAGAAGAG TATGAGGTTG TCATCACAAA TTACGCAGGG TTGTATCGGT ACCGGCTTGG AGATGTGGTA AAGATCATTG GTTTCTACAA CAACACTCCC CAACTAAAAT TCATATGCAG GAGAAACCTA ATCCTCTCGA TCAACATCGA CAAGAACACC GAAAGAGACC TCCAGCTTTC AGTAGAATCG GCTGCAAAGA GACTCTCAGA AGAAAAGATC GAAGTCATAG ACTTCTCTAG CCACATCGAT GTCTCGACAG ATCCAGGACA TTACGCTATA TTCTGGGAGA TTTCAGGAGA AACAAACGAA GACGTTCTTC AAGATTGCTG CAACTGTTTA GACCGAGCAT TCATCGATGC GGGTTACGTA AGTTCCCGGA AATGCAAGAC TATTGGAGCC TTAGAGCTGA GAGTTGTCGC AAAAGGAACT TTCAGGAAGA TTCAAGAACA TTTTCTCGGG CTTGGTTCAT CGGCTGGACA GTTTAAGATG CCAAGATGTG TGAAGCCAAG TAATGCTAAG GTTCTCCAAA TTCTGTGTGA GAATGTGGTG AGTAGCTACT TCAGCACAGC GTTTTGACTA AACTATAAAT TGTGAAATCA AGAAAGTGGT TTTCAGTTGC TTATTTGTCG TTGTTGTCTT TATTGTCAAT ATAGTTTCTT TACGTTATTT AATTGAGCAT AAACTTTTTA TCTTTATAGA AAAGAAATAT TGTATCACAG TGGTTTTACT TTGCTTTTTT GTGCAATTAG TGTTTGATGT GACGTTTACC TTTATTATAC TTATAAATAA AAATCAAGAT TCGAATTTGA TTGTCTGTAT GGAGAATAAA ATTCGGGTAA TCT |
| Length | 2083 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21342390.. 21345351 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G46370.4 |
| Description | Auxin-responsive GH3 family protein |
| TAIR curator summary | Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses. |
| Alias | [AtGH3.11][FIN219][JAR1][FAR-RED INSENSITIVE 219][JASMONATE RESISTANT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.42615 |
Ahg476975 | related to AP2 4 |
| 18.2483 |
Ahg488680 | Chaperone DnaJ-domain superfamily protein |
| 20.8567 |
Ahg471438 | vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) |
| 21.4243 |
Ahg478188 | HEAT repeat ;WD domain, G-beta repeat protein protein |
| 27.1293 |
Ahg332000 | U-box domain-containing protein kinase family protein |
| 27.8568 |
Ahg912744 | MEI2-like protein 5 |
| 36.4555 |
Ahg493778 | DCD (Development and Cell Death) domain protein |
| 38.7298 |
Ahg329112 | Cytochrome b561/ferric reductase transmembrane protein family |
| 39.7492 |
Ahg931308 | Protein of unknown function DUF829, transmembrane 53 |
| 40.9878 |
Ahg944104 | alpha/beta-Hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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