| Annotation |
|---|
| Description | jgi|Araly1|912744|Al_scaffold_0001_2998 |
| Sequence |
ATGGATATTC CACATGAAGC AGAAGCTGGA GCTTGGGGGA TTCTCCCTGG ATTTGGTCGT CACCATCATC CCTCCAGTGA TGCTACTTTG TTCTCCAGTT CTTTACCTGT TTTTCCCCGT GGAAAACTGC AATTGAGTGA TAACAGAGAT GGTTTCTCAC TGATAGATGA TACGGCTGTT TCTCGCCCAA ACAAGTTTAA CGAAAGTGCT GATGACTTTG AATCTCATTC CATTGGAAAC CTGCTCCCTG ATGAAGAGGA TCTTTTGACT GGGATGATGG ATGATCTTGA CCTGGGCGAC TTACCAGATG CTGATGATTA TGATCTTTTT GGTAGTGGAG GAGGAATGGA ACTTGACACT GATTTTCGAG ACAACTTGAG CATGAGTGGT CCTCCAAGGT TATCCCTTTC AAGTCTTGGT GGAAATGCGA TTCCGCAATT CAATATTCCA AATGGTGCGG GAACAGTTGC TGGTGAGCAT CCTTATGGTG AACATCCCTC GAGAACTTTG TTTGTCCGGA ATATTAACAG CAATGTAGAG GACTCTGAAC TCACAGCTCT CTTTGAGCAA TACGGTGACA TTAGAACGCT CTATACTACT TGTAAGCATA GGGGATTTGT CATGATATCT TATTATGACA TTCGTTCTGC TCGAATGGCT ATGCGGTCTT TACAGAATAA GCCATTAAGA CGGAGAAAAT TAGACATTCA CTTCTCAATT CCTAAGGATA ATCCATCTGA GAAAGATATG AATCAGGGGA CATTAGTGGT TTTTAACCTG GATCCCTCAA TTTCTAATGA TGACTTACAT GGAATTTTTG GTGTTCATGG CGAGATCAAA GAGATAAGGG AAACACCACA TAAGAGGCAT CACAAATTCG TTGAGTTTTA TGATGTCCGA GGTGCTGAAG CCGCATTGAA GGCATTAAAC AGGTGTGAGA TTGCAGGAAA ACGTATAAAG GTTGAACCTA GTCGCCCTGG AGGAGCTCGT CGAAGCCTGA TGTTGCAACT TAACCAAGAA CTTGAGAACG ATGATTTGCA TTACCTACCA ATGATTGGTT CACCCATGGC AAACTCTCCC CCAATGCAAG GTAACTGGAT GCTGAACAGT CCCGTGGAAG GTAGTCCGCT TCAAAGTGTA CTTAGTAGGT CACCTGTTTA TGGGTTAAGT CCTACAAGGA ACGGCCACTT GTCTGGTTTG GCTTCTGCTC TAAATTCACA AGGACCAAGC TCGAAGCTTG CACCCATTGG CAGGGGTCAA AGTGGTAGCA ACGGCTTCCA ACAGTCATCA CATTTATTCC AAGAGCCTAA GCTGGAGAAG AAGTACACAG GAAATATCTC TCCTTCTGGT CCTTTGATCT CAAATGGTGG TGGAATTGAG ACGTTGTCGG GTTCAGAGTT TCTCTGGGGA AGTCCTAACT CACGCTCTGA ACCTTCAAGT TCCTCGGTTT GGTCAACATC ATCAACTGGG AATCCACTCT TCTCAGCTCG GGTAGACCGA TCTGTTCCAT TTCCGCATCA GCATCAAAAT CAAAGTCGTA GCCATCATCA CTTCCATGTT GGGTCTGCAC CATCTGGTGT TCCTCTAGAA AAGCATTTTG GATTCGTCCC AGAGTCTTCA AAGGACACTT TGTTCATGAA CACTGTTGGT TTTCAAGGAA TGAGTGGAAT GGGTCTCAAC GGTGGAAGTT TCTCGTCAAA AATGGCAAAT AATGGGATCA TTAACCCTGT AAGCATGGCC GAAAACGGTT TTTCAAGTTA CAGAATGATG TCTTCACCAA GATTCAGCCC CATGTTCTTA AGCAGTGGTC TAAACCCAGG ACGGTTCACC TCTGGCTTCG ACGGTTTGTA TGAAAATGGA AGGCCTCGTA GAGTCGAGAA CAATTCGAAC CAGGTTGAGA GCAGGAAACA GTTTCAACTT GATTTGGACA AAATTCTTAA TGGAGAGGAT TCTCGGACTA CCTTGATGAT TAAAAACATA CCAAACAAAT ACACCTCAAA GATGTTGTTA GCTGCAATTG ATGAAAAGAA CCAAGGAACT TACAACTTTC TCTATTTGCC CATTGATTTC AAGAACAAAT GCAATGTTGG CTATGCATTC ATCAACATGC TCACTCCAGA ACTCATCATT CCTTTTTACG AGGCTTTTAA CGGGAAGAAG TGGGAGAAGT TCAACAGTGA GAAAGTAGCT TCATTGGCAT ATGCTCGGAT ACAAGGAAAA TCTGCCCTTA TAGCTCATTT TCAGAACTCA AGCTTGATGA ATGAAGATAT GCGCTGCCGT CCAATTATCT TCGATGCTCC TAACAATCCA GACTCTGTTG AACAGGTTGT CGTTGAGGAA ACTAAGAATG TGGATCTTCT TGACTCTGAG CTCAGTGATG ATGGCAGAGA GAAAAGCTGA |
| Length | 2400 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 12302945.. 12306279 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G29400.1 |
| Description | MEI2-like protein 5 |
| TAIR curator summary | A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices. |
| Alias | [AML5][ML5][MEI2-like protein 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg474651 | ubiquitin-protein ligase 1 |
| 4.24264 |
Ahg921319 | T-complex protein 11 |
| 4.24264 |
Ahg489979 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| 5.2915 |
Ahg495173 | Clp ATPase |
| 6.63325 |
Ahg473917 | heavy metal atpase 4 |
| 8.48528 |
Ahg334507 | flavin-monooxygenase glucosinolate S-oxygenase 5 |
| 8.83176 |
Ahg470920 | atypical CYS HIS rich thioredoxin 4 |
| 9.8995 |
Ahg944763 | calcium-binding EF hand family protein |
| 11.4018 |
Ahg480602 | ubiquitin family protein |
| 11.4891 |
Ahg950423 | Galactose oxidase/kelch repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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|