Detail


ID : Ahg483906

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483906|fgenesh2_kg.4__2966__AT2G47300.2
Sequence
ACTGATTCTC TAAGCCGTGT CCGTGTGCCA GTGTCTGCCT TTGTCTTATT ATCACTGCCG CAGTTCCTAA TCTTGCCCGC CAACTGTTCG TCAAATTGCC TGAACCAATT GTTCTTCCCA AAAGTTTGGA TTTTGGGGAT TCTTCAAGAA TGGCCACTAC TACGAATGGA AACTCTAAGA AAAGAGATGG TGGTTTATCG TCGCTTGCCC CTCGCAAAAT CAACGTCCAG AAATTCTCAG AGGCTCGAGC AGCGGAGCTC GAATCTCTTC ACTCCATTGT GTCTGAACGT TTGAACAAGG ACTTTCGATC AAAGAGGAAT AAGAGGAGAA GGACCAATTC TTACAATAAT CAACCTGCAA AGAAGCGTTA TATACAGAGG CAGAAATCAG AGTCATTGAT TGGTCAAGTA TCAGGAGGAG GAGACCATGA AACAAAGATC ACTAGACGAG TTAAGAGAAG AATGGAACTT AAAGGGAACC CTCAATCTGG TTTTTGTACT TCTGGTGATG GGACAAAGAG GCTGAGAACA CATGTTTGGC ATGCTAAACG ATTTACGATG ACTAAGCTTT GGGGCTTTCA CCTTCCTCTT GGTTTACATG GAAGAGGAAG GGGATCTAGG GATGTCTTGA AGCAATCTAG GCAAGGGGTT CTTGTTCATG ATGCAAGCTA TCACATTGCT GTGCAATTGG AGGGTCCAGA GGGCTCACTC TTGTCGATAT TAAATATGCT ACTAGAGCCT TCTCCTTCAT CTCATTCCAA GGAAGTTTTT GACTCTATTC TCACAGGCCG TAGTTATGAA AACGCCATGC TTTATCATCT CGAACCACCA GTTTCTCAGG CGATTGCTCC TGTAACTTAT ATGTGGAGAC CTTCTCAGAT ACCAAAGAGA AGAGATGAGG AGAAAGGAGG GGACGGCATA GGAACTGATC GCCCAGTCTC AGATAGAGAT TATGTAGACT TTCGAAAACT TTGGGTGTGG ATCCATGCTT CTTCCTTCAC TGAAGGATAT GCTATTCTTA AAGTAGCTTG TCAGAAACAG ATGAATGAGA CAGGTGTCTC AGTTGATTGC TTTTCACTCG AGGGCCAGCT TGCAAAACTT GAGATTTTTG GTCCAAAAGC ATCTCATCTT CTCCAGAAGA CCCTACATCC TGCTCCAAGT AGCTCAGAGG ATACCTCTAT TTCTAAAATG TGTTCAATGG AAAAAGCTGA GGTTAAAAAC GTTGCTGATC CTTACAAAGA AGAGAACGTA TCATCTGGCG CTATTTTAGC ACAGTTTGTC ATAGATCCGC GGTTAATCCT GAATAGTCCA CGTGATGATA GTACAGTGTC ATTTGAAACG ACCAAAACTG AGCCTACTGA GTCACTTGAA ACAACAACCA ACGCTGAGGC TGAAACTTTT CCTGAAGTTT TCAACTGCTT GTGGGATGCA AATCGTGAGC TGAACCCTCC AGAAGAAGAG AACATGTTGT GTTGGGAAAA GCATCAAAGT CGTCTGGATT CTCTTTGCCT CGATGACCCA GCTGCTGATG TTCCAAAGGT ATCTAGTAGG CTAAGGAGTT CAAGGTCTTG TCCTTTACTG CTTCTTAAAC ATAAAAAACT TGGGAATGCA CCTACCGGAT GGTCTCTTAT ACTTCCCCTT AGTTGGATCA AAGTCTTCTG GAATGCCTTG GTCTCAAAAG GAGCTCATGC AATAGGTCAG AGGGAGAAAC GCTGGGTTTC TTGTGATGAT GGTTTGCCCT TTTTCCCATC AGATTTCCCG GACTGTAAAG CGTATTCATC TTTTACACTG AGCGAGGCTG CAGACTTGGA AGAAAAGGCA CAACGTCGCC CTCCAGCCAT GAGACCTTTC AGAATTCCCA TTCCACCTCC ATGGAATAGT ATCCACGTCA CACGTTCTAT TGGAGAGAGT TCCAATCAAA AGCTTACAAG CAATGGGACG AATGGAGTGG AAATTTCCAG TTCTGGTGGT AATCTATTTG ATGGTATCGT GGCAAGAACA TCAGATTCGC TGACTACTTT TCTCCAAACA TTCACAAGTG ACAACTTGCT TTTATTACCT CACAACACTT CAAAAACAAA CCTTATGAAG AAGCTTCAAG AAGATGATAA AAAAGTAAGA GCTCAGATCC ATCAGAGTAG TAAGAAACTG TGCCTCGTCA GAGTTCTTTT ACATGCTTTC AAGGAAGGTT CTTTCGAAGA AGGCGCGGTT GTATGTGTAC CAACTCTTGC AGACATATCA TTGCTAAAAT CCAGCTGCGG TGAAGGAGAA GAAGGGCGTG TTACAATGCC GCAATCTTCT GTAAGTTCTT ACTTTCAAGA ACAACCTTCT GGAAGCTGGG AACTAAATGT CTCCGAAGAC ACTCTTACAG AGCAATCTCA TAGATGGCCA ATCGGGTTTG TAACAACAGG ATTTGTCCGT GGGAGTAAAA AGCCGGCGGC AGAAGCTTTC TGTGATGCGG TGTTGTTAGG GAGACTAAGA GACGAGCAAT GGAGAGACAA AGATGTAAAA CGGAGGAAGA AGCAGATTTA TGTTTTAGTT AGAAACCTAA GATCTTGTGC GTTTAGACTC GCACTTGCTA CCATTGTCTT GGAGCTACAA GACTCTTGTG ATGTCCACTG CTTTTAAAAA
Length2630
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21799385.. 21802938
Download Sequence
A.thaliana
AGI-codeAT2G47300.2
Descriptionribonuclease Ps
TAIR curator summary
Alias[POP1][similar to yeast POP1]
Gene coexpression
MR
MR Locus Description
16.9115 Ahg355947 Tetratricopeptide repeat (TPR)-like superfamily protein
18 Ahg492753 Tetratricopeptide repeat (TPR)-like superfamily protein
22.1811 Ahg933121 2A phosphatase associated protein of 46 kD
23.4734 Ahg495889
28.8444 Ahg488495 Pentatricopeptide repeat (PPR-like) superfamily protein
44.1814 Ahg478184 Pentatricopeptide repeat (PPR) superfamily protein
45.4092 Ahg913052 pentatricopeptide (PPR) repeat-containing protein
47.3286 Ahg480611 phosphate transporter 3;3
50.0799 Ahg484816 zinc induced facilitator-like 2
60.7947 Ahg318974
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression