Detail


ID : Ahg355947

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|355947|fgenesh1_pg.C_scaffold_7003120
Sequence
ATGGCTGCAG ATGATGTTAT AGTCATGAGT AGAATTGTTA AACATCCAGC TATCTCTCTT TTGGATTCCG GCACTACATT TAAGGAAATT CGGCAAATCC ATGCCAAGCT CTACGTCGAC GGGACACTCA ACGATGACCA TCTCGTGGGT CAGTTTGTAA AGGCAGTGGC TTTGAGTGAT CACACATACT TAGATTATGC GAATCAGATT CTTGATAGGT CTGATAAGCC TACATTGTTT GCTCTCAATT CTATGATCAG AGCACATTGC AAGAGCTCTG TTCCAGAAAA AAGCTTTGAT TTTTATAGTA GGATACTCTC TTCGGGAAAT GGTCTTAAAC CGGATAATTA CACTGTCAAC TTCTTGGTTC AGGCGTGTAC GGGGTTAGGA ATGCGTGAGA CGGGGCTTCA AGTTCATGGT ATGACTATCA GACGTGGTTT TGACAACGAC CCGCATGTCC AGACTGGGTT GATTTCTTTG TATGCGGAGC TTGGCTGTCT GGATTCTTGT CATAAGGTTT TTAATTCGGT TTCGTACCCG GATTTTGTGT GTCGGACAGC GATGGTTACA GCCTGTGCAA GATGCGGGGA TGTCGCTTTT GCGCGGAAGT TGTTTGAGGG AATGCCGGAA AAGGACCCGA TTGCCTGGAA CGCGATGATC TCTGGCTATG CTCAGGTTGG TGAGTCAAGG GAAGCTCTAA ACTTGTTTCA TTTGATGCAG TTGGAAGGTG TGAAAGTCAA TGGGGTTTCT ATGATTTCTG TTTTATCGGC TTGCACTCAA TTGGGTGCTT TAGACCAAGG GAGATGGGCG CATTCTTACA TTGAGAGAAA CAAAATTAAA ATCACTGTGA GGCTTGGTAC TACGTTGGTC GACTTGTATG CAAAATGCGG AGACATGGAC AAGGCTATGG AAGTTTTCTG GGGTATGGAA GAGAAGAATG TGTATACATG GAGTAGCGCC CTGAATGGGT TAGCCATGAA TGGTTTCGGG GAGAAATGTC TCGAGCTTTT CTCTCTTATG AAACAAGATG GTGTTACTCC AAACGCTGTC ACATTCGTCT CTGTTCTCAG AGGTTGTAGT GTGGTTGGTT TTGTAGATGA AGGGCAAAAA CATTTTGATT CGATGAGGAA TGAGTTCGGG ATAGACCCTC AGCTCGATCA CTATGGCTGC TTAGTTGATT TGTATGCTCG TGCAGGCCGC TTAGAAGACG CAGTAAGTAT CATCCAGCAA ATGCCCATGA AGACTCATGC TGCTGTTTGG AGTTCTTTGC TCCACGCATC TAGAATGTAC AAGAACCTTG AACTTGGCGT TCTTGCATCT AAAAAAATGC TCGAGCTAGA GACCGCAAAT CACGGAGCTT ATGTCCTCTT ATCAAACATA TATGCAGATT CAGACGATTG GGACAATGTT AGTCACGTTA GACAGTCAAT GAAATCTAAA GGAGTCAGAA AGCAACCAGG GTGCAGTGTA ATGGAGGTAA ATGGAGAAGT CCATGAATTC TTTGTCGGAG ACAAATCTCA CCCAAAATAT AACGAAATCG ACGCGGTTTG GAAGGATATC TCGAGAAGGC TGAGACTCGC TGGATATAAG GCGGACACAA CCCCGGTTAT GTTCGACATA GATGAAGAAG AGAAAGAGGA TGCATTATGT CTGCATAGCG AAAAGGCCGC CATTGCATTT GGTATAATGA GTTTGAAAGC AGATGTCCCG ATTCGGATCG TGAAGAACCT TCGGGTTTGT GGAGATTGTC ATCAGGTTTC CATGATGATC TCCAAGATTT TTAACAGAGA GATCATTGTG AGAGACAGAA ACAGGTTCCA CCATTTCAAA GATGGGAGAG GATATTTGGG GAAATGTTTT GAGGTTTTAT CTAGGATGAT GAGATCTGAG GTGGGTTTTA GACCTAATGA AGTTACGTTT TTGTCGATGA TTTCGGCTTG TGTTCATGGA GGAAATAAGG AAGAGGGAGT TTGCATTCAT GGGTTGGTGA TGAAATCTGG TGTGCTTGAG GAAGTTAAAG TTGTGAATGC TCTTATGAAT TTGTATGGAA AGACTGGAGA TTTGATTTCG TCCTGCAAAT TGTTTGAGGA TTTGAGTGTA AAGAATTTGG TTTCGTGGAA TACGATGATT GTGATTCACT TGCAAAACGG TTTGGCCGAA GAAGGTCTGG CTTACTTCAA CATGAGCAGA TGGGTTGGGC TTAAGCCTGA TCAAGCCACT TTTCTGGCTG TTCTCCGTGT CTGTGAAGAC ATCGGGGTAG TGAGATTGTC ACAAGGAATT CATGGGCTAA TCATGTTTTG TGGGTTCAAT GCAAACACAT GTATAACGAC TGCGTTATTA GACTTGTATG CAAAACTTGG GAGGTTGGAG GATTCGTCTA CGGTATTTCT TGAGATTACT TCTCCTGATA GCATGGCGTG GACAGCAATG CTTGCTGCTT ATGCCACTCA CGGGTATGGA AGAGATGCAA TAAAGCATTT TGAGCTCATG GTTCACTATG GTTTAAGTCC TGATCATGTA ACCTTCACTC ACTTGTTAAA TGCTTGTAGT CACTCAGGTC TGGTCGAAGA AGGGAGGTAT TATTTCGAAA CAATGTCGAA AAGATACAGA ATTGAGCCCA GGTTAGATCA CTACTCATGT ATGGTTGATC TCATGGGTCG ATCCGGGCTT CTCCAAGATG CTTATGGATT GATCAAAGAG ATGCCAATGG AGCCGAGTTC TGGTGTTTGG GGAGCTTTGC TTGGTGCTTG TAGGGTTTAC AAAGATACCC AACTCGGAAC AAAAGCGGCA AAGAGATTGT TTGAACTAGA GCCTCGTGAT GGTAGAAACT ACATAATGCT ATCAAACATC TATTCAGCTT CTGGTCTATG GAAAGATGCT TCAAGAATAA GGAATCTGAT GAAACAGAAA GGTCTTGTAA GAGCTTCAGG GTATAGTTAC ATTGAACATG GTAATAAGAT TCATAAGTTT GTTGTTGGAG ATTGGTCTCA TCCTGAATCA GAGAAGATAC AGAAGAAGCT AAAAGAGATT AGAAAGAAGA TGAAGAGTGA GTTGGGATTT AAATCAAGAA CAGAGTTTGT ATTACATGAT GTTGATGAAG ATGTGAAAGA AGAAATGATT AATCAACATA GTGAGAAGAT TGCAATGGCG TTTGGGCTTT TGGTGATTAG TCCAATGGAG CCAATTATCA TAAGGAAGAA TCTTAGAATT TGTGGAGATT GTCATGAAAC AGCAAAAGCA ATTTCATTGA TTGAAAAAAG AAGAATCATT ATTAGAGATT CTAAGAGGTT TCATCATTTC TTAGAAGGAT CATGCTCTTG TAGAGATTAT TGGTAG
Length3336
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20916187.. 20920096
Download Sequence
A.thaliana
AGI-codeAT5G40405.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.9545 Ahg489246 cleavage and polyadenylation specificity factor 100
12.9228 Ahg890100 double-stranded RNA-binding domain (DsRBD)-containing protein
15.9687 Ahg490077
16.9115 Ahg483906 ribonuclease Ps
24.1661 Ahg482061 embryo defective 1381
30 Ahg484454 Tetratricopeptide repeat (TPR)-like superfamily protein
30.6268 Ahg888940 Tetrapyrrole (Corrin/Porphyrin) Methylases
31.9374 Ahg496296 Pentatricopeptide repeat (PPR) superfamily protein
36.3318 Ahg480906 Tetratricopeptide repeat (TPR)-like superfamily protein
40.2492 Ahg482852 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression