| Annotation |
|---|
| Description | jgi|Araly1|483950|fgenesh2_kg.4__3010__AT2G47680.1 |
| Sequence |
GTACGACAAC AATGGCGGTT TCTTCGCCGA CTTCGACTTC CAGCTCTTCT GAATCGTTAC CTTTACCCTC CTCGAACTTC GCTTCGCTTC CGATTATGGC GATGAAGAGG AGAATCATCG ACAAAATCCT CGAGAATCGC GTCACTCTCA TCGTCGGCGA GCCTGGATGC GGGAAGAGTT CACAAGTTCC ACAATTCCTT CTGGAAGCAA ACATGGCTCC CATTTTGTGT ACACAGCCTA GGAGATTTGC GGTTGTAGCT GTTGCTAAGA TGGTTGCAAA ATCTCGCAAC TCTGATTTAG GCGGAGAAAT AGGTTACCAC ATTGGACATT CTAAGATTTT CACTGAAGGG TCCAAAATTC TCTTTAAAAC TGCTGGAGTT CTGTTGGATG AAATGCTAGA CAAGGGGTTG AATGCACTTA AGTATAAGGT TATCATTCTT GATGAAGTGC ATGAAAGATC TGTGGAGTCC GATCTTGTTC TTGTCTGTGT TAAGCAGTTT CTCATGAAGA ACAATGACCT CAGGGTGGTC TTGATGTCTG CAACTGCTGA TATTACAAGG TACAGAGACT ACTTTAAAGA ACTAGGCAGG GGTGAACGCG TAGAAGTAGT TGCTATTCCT AGCCCTGACC AGAGAACAAT TTTCCAGAGA AGAGTATTAT ATCTTGAGCA GGTTGCAGGA TTGCTTGGTA TGAGTTCTGA TTTGTCAGCT TACTGTCCTG GTCCAAGTCC TTCTTCAGCT GATACTGAAA TCAAACCTGA ACTGCAAAAT CTTATTCATG ATCTCATCTT ATATATTCAT GAAAAGGAAC CAGACATTGA GAAGAGTATT TTGGTTTTCC TTCCAACATA CTACTCACTT GAGCAGCAGT GGCATCAATT GGAACCCTTT CGTGCATCTT TTGAGGTTCA CATATTGCAC AGAAGCATTG ACACTGAGCA AGCCTTGGCA GCTATGAAGA TATGCAGATC CCGCCGCAAG GTAATATTGG CTACAAACAT TGCGGAATCT TCTGTAACAA TACCCAAAGT AGCCTATGTC ATTGACTCGT GCCGGTCTCT GCAAGTGTTC TGGGAGGCAT CCAGAAAAAG AGACGCAGTT CAGCTTGTTT GGGTCTCTAG ATCTCAGGCT GAGCAACGTA GAGGGAGGAC AGGTCGAACA TGTGATGGTG AGGTGTATCG CCTGGTGCCG AGTGCATTTT TTAACAAGCT TGAAGAACAT GAGCCCCCAG CTATACTTAA GCTGTCATTG AGACAACAAG TTCTCCATAT TTGCTGCACG GAATCCAGAG CCATTAATGA CGCAAATGTG TTGCTGGCAA AAGCTATGGA TCCACCAGAC CCAAATGTCA TTGATGATGC ATTAAAGATG CTATTAAGCA TACGAGCATT GCGGAAATCG CCCAGGGGAC GTTACGAGCC CACATTTTAT GGACGGTTAC TTGCTAGCTT CCCATTGTCC TTTGATGCAT CTATTCTGGT CGTCAAGTTT GGTGAAATGG GAATGCTAAG AGAAGGGATT CTATTAGGTG TCCTGATGGA TACCCAACCG CTTCCTATCC ATCATCCTTT TGGAGATGAT TCACTGTTTC TAGAGTATGT TGACCACTAT TTTGGTGGCA GCAAGACCAT TTGTAGTGGG CGGAGGGAGA TGGTACTCAT GGCAAACTTT TGTGCTTTTC AGTTTTGGCA GCGTGTCTTT AAGGATAAGC ATCGTCTTGA AAACTTGAAA CAACTTCTGG CAAAAGAGAA AGACAAAGAT CTCAAGTTGA TGTTTCCTGA GATTGAAAAA GAGTGGTGTG ATTTCCACAA TATTCTTCAG TCATCGTTCT ATCATGTGTC TGAGATGTAT GAAGATACAC TTAGCTCATT TCATCGTTTC AGACCTCAAT TCATCAGTTC TTCTGATTCT CTACCAACCT ATTACAATCC ATATGAATTT TATCACACAT GCTATATTGA GTGCCAACTC TCTGAGGATA AATATCTACA CTCTGAGGAC GAAGATAACA ATCAACCACC TCCTGAAGTA AGAAAATGTG TATCAATGCC GTTTGTTCCT CCTAACGCAT TCCAAGCTTA TGCTGTTGCA GAAAACATGG CCAGTATTAT CAAAGAGATA AGAACTCAAT GCACACCATC TGAATCTGAT AATGGCCACG GAGCAATCGA ACCTGAGGAT TACGTTGAGG ATGGAGAGGC CCCGGTCTGT GTATATTTTC TTAATGGATT TTGTAACCGT GGTGACCAGT GCACGTTCTC TCATACTCTT CAGTCAACAA GACCAGCCTG CAAATTTTTC GCGTCATTGC AGGGATGCCG AAATGGAGAA TCGTGTTTGT TTTCCCACGT CATGCGAAGA CGGACAACAT CATATCGTCC ACCTCCCCAA TGCCTTCCAG AAGAAGATGG CTCTTCCACA TCTTCCCTTC TGGATTTGTT TCCTACTTCT TCAGAGGGAT GTATCCTTGT GTTTGATGAC TCTGCCATGC ATTTCACCTC AAGTATAGCC AATCGTTATC CGTCCTGGAG AATACTCGCC ACATCATCAT CTTCAGATAT GCTTCTCTGT GATTCATCAC TTGCAAACAC AAGAATCTTC TGGGGTCTCA ATCATCCCTA CCAGACAATC ATCTCAAAAG CAGGAGGGGA GAACCCAATC CCCTGGAACG AAGTGAAATG TGTGTTGTGG TTCCTTAACC CAGACAGCTA TGCTGATACT CCTGAGGGAC AGAAAACTAT TCTGCAGAAT TTCTTCGAGT ACATGGCAAT CAGATTACTC GGTGATAATC TTTACGAAAT CCGAGTAATT CTCACAATGA ACAACGTCAG ATTCTCACTC TTACAGGTTG AGAAGCTAGC CAGAGACAGC TTCTTCTTCC TTGGAGAGTC TTTCCCACAC AATTCAGTAA GCTTTGGTGA ATTTCAAGAC ACATTAACAA TCCAGAAGCC TATGCTAGTC TCGAGACCAA TCTCCTATGT CTTTAATCTC CATTCGCCTT CTGACATCCA GTTTGGTGAC TACACCTCTC TTCTGCACAA ATCTCTGCAC AACAAATGA |
| Length | 3059 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21954356.. 21959479 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G47680.1 |
| Description | zinc finger (CCCH type) helicase family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg919313 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 16 |
Ahg495779 | Protein kinase superfamily protein |
| 20.4939 |
Ahg926223 | plasmodesmata callose-binding protein 4 |
| 20.5913 |
Ahg934986 | S-formylglutathione hydrolase |
| 22.7596 |
Ahg943915 | Leucine-rich receptor-like protein kinase family protein |
| 28.1425 |
Ahg478296 | S1FA-like DNA-binding protein |
| 32.3574 |
Ahg491633 | SHK1 binding protein 1 |
| 33.4664 |
Ahg483883 | squamosa promoter binding protein-like 1 |
| 36.9865 |
Ahg482865 | transcript elongation factor IIS |
| 37.3497 |
Ahg471861 | arginine/serine-rich 45 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|