| Annotation |
|---|
| Description | jgi|Araly1|471861|fgenesh2_kg.1__1815__AT1G16610.2 |
| Sequence |
GTCCGTCGCT CTCCTCTAAT CTTTTTTATC CGCTAGGGTT TTGAAGCAAG GTTTCTCGCG ATTTTCTCGA GTATCGCCCA TGGCGAAACC AAGTCGTGGC CGTCGTTCCC CTTCCGTGTC TGGCTCATCA TCTCGTTCCA GTTCCAGATC TCGTTCCCGC TCCGGTTCTA GTCCCTCCAG GTCTCTTTCC CGCTCCCGCT CCCGGTCCCG TTCTAGATCG CTCTCTTCAT CCTCATCTCC TTCCCGGAGC GTCAGTTCTG GGAGTCGCAG TCCTCCTCCT CGTGGAAAGA GTCCTGCTGG ACCTGCTAGG CGAGGTCGCT CTCCTCCTCC TCCTCCTCCA CAATCTAAAA GAGCATCTTC ACCTTCTAAG AAAGCTGTTC AAGAATCTCT TGTTCTTTAT GTTGATTCTC TTAGCAGGAA TGTGAATGAA GGCCATCTCA AAGAGATATT CGGCAACTTT GGTGAAGTTA TACACGTCGA AATTGCCATA GATCGATCTG TTAATCTTCC AAAAGGACAT GCTTATGTTG AGTTCAAGGC AAGAGCTGAT GCTGAGAAAG CGCAGCTGTT CATGGATGGT GGCCAAATTG ATGGAAAGGT TGTTAAAGCA ACGTTCACAC TACCACCTCG TCAGAAAGTA TCTTCACCGC CTAAACCTGT CTCAACTGCA CCAAAAAGAG ATGCTCCTAA ATCTGATAAT GCTGGTCCTG ACACTGAGAA AGATGGGCCC AGGCGCCCAA GAGAGAGACT TTCTCCAAGA AGGCGATCAC CTCTACCTAG GAGAGGCTTA TCACCTAGGA GATTTCCTGA TTCTCCCCAT CGCCGGAGGC CGGGATCTCC TATCCGTCGT CGCGGTGATA CACCTCCTAG GCGCAGGCCA GCATCACCAT CTAGAGGCCG TTCTCCATCT TCTCCGCCTC CAAGACGAAA TAGATCTCCT CCAAGCAGGG GATCCCCTAG AAGAATCCGT GGCAGTCCTG TTCGAAGACG GTCTCCTCCT CCTCTAAGAC GAAGGTCTCC ACCTCCAAGG AGACTACGCA GTCCTCCCAG AAGATCTTCA ATCCGCAGGC GTAGCCGATC CCCAATTCGT AGGCCTGGTC GCTCTCGTTC AAGGTCCATC TCACCCCGCA GGGGACGAGG TCCAGCTGGG AGACGTGGGA GGTCTTCTTC TTACTCTAGT TCGCCAAGTC CCAGAAGGAT TCCTAGGAAG ATTTCAAGGA GCCGCAGTCC TAGGAGGCCA CTGAGAGGAA AAAGAAGCAG CAGTAACAGC AGCAGCAGCA GTTCACCGCC ACCACCACCA CCACCTCGCA AAACTTAAAA AAAAAAAAAA AACTTGAGTC TTCATGTAGC TCTCTTTCTC CATCTTTATC TTTATCATCA GTGACCAGAT GAGAGTTGTG GCTTTTGTAG TGTTTGGATG TTTTAATCTT CTTTTGTGGA TCTCCCCATT AGATG |
| Length | 1455 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6641213.. 6644154 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G16610.3 |
| Description | arginine/serine-rich 45 |
| TAIR curator summary | Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth. |
| Alias | [AtSR45][RNPS1][SR45][arginine/serine-rich 45] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg473146 | Kinase-related protein of unknown function (DUF1296) |
| 7.87401 |
Ahg478516 | lysyl-tRNA synthetase 1 |
| 13.2288 |
Ahg478747 | SC35-like splicing factor 30A |
| 17.6635 |
Ahg923954 | related to AP2 12 |
| 24.3721 |
Ahg918854 | GRF1-interacting factor 2 |
| 24.9199 |
Ahg473294 | Coatomer epsilon subunit |
| 25.632 |
Ahg476521 | hydroxyproline-rich glycoprotein family protein |
| 28.4956 |
Ahg490654 | FMN-linked oxidoreductases superfamily protein |
| 31.749 |
Ahg355577 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain |
| 35.8748 |
Ahg341089 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|