| Annotation |
|---|
| Description | jgi|Araly1|484005|fgenesh2_kg.4__3065__AT2G48120.1 |
| Sequence |
ATGGCGGCGA CGTCGTTGGT TCTATCGTGC GCATCCCCTC TATTCAGCTC TCGGCTTGTT TCTGCTACGA AGACGCTGAC TACAGAGTTC CCGATTTCTA CAGGTCAGTT TCTCGGGGGT CTAAATTCTC CTGCCTATTT CTCAGCTAAA TTCCTAAGAA GATGCTCGGG AAAAGATGAA GTGCTTCTAC AAGGAATGCC ACCGGAGTAT TACGATGATG AATGGCAAGC TCAACAGAGA GAGAAGACCA AAGATCTGCG GCGGATGCAG CGGGAGGAAG AAGAAGAAGA GGAGAGAAAG ATTGAAGAAT ACCGTGAAAT TGGCATGAGG TTGAAGGAAT TTCCTGAGCA AGACTTAAGG AAAGCCAGAA AGCTCGTCTC CAGCTTCATC AGAGCTGCCG AGGAAGTCGA AGAGAGAATT GAAGAAGCAG CCGAGAAAGG AGAACTTGAC GAGCTTGTCC TCATGATCAT ATGGAACCGG CTTGACCTTG CTCGCCGCGA TGATGAGAAG GACGCCATAA GAAGTCTTGA TCTTTTGTAT AGAAGAGTCG AGACAGAGAT CTTAAAACGG CAAGCAAGTC CTGCAATGAA TCTGCTGAAT GATCTTCTAA ACATGCATGA TGGCTTTGAA GACGATGCTT GGCTCAAGGA CTGCAGAAAA CGCATGGCGG AGACCTTCCC CCGAGAAGAC CCCTTCAGCA TTCTAATGCC TCCGGGATTC GACATTGATA TGCATCAAGG ACAGTTGCGA CCGCCCATTG AGACTGAGAC AGACAACACC CTTCTGAGAG TAGACTTTGT AAGAGAAGTG GATGCATTGC TACAGGAAGT GAGGATAGAG GAAGACGCTG AAACTGGTAG CAAAGGAGAA GGGCTTGATC CTGAAGCTAT AGCACTTAAG TTTAAGCAGC AGGAGAAGCA ACGAACCATC CGCCAAGTTG AAGCCATTCT TGATTTGGCC CTCAACTTGA AGTGGTAGGG AGGTAACAAG AACATCAATC TATATGCTAT AATATTTTTT TATAGATAGA CCTTAGATTT TAGATTGATT CAGGCGTTTT TGTTTAGAAA TGAATGAATC AAATAATAGG TTTTGGCCAA AAATTCCAAA TCAAAATGTT GGTGACTAAT CTCTTTGCTT CATAGTCTCT CTCCACAATC ATCTCTTCCT CTTTC |
| Length | 1175 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 22108117.. 22109843 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G48120.1 |
| Description | pale cress protein (PAC) |
| TAIR curator summary | The pale cress (pac) mutant affects chloroplast and leaf development; mutants are ABA-deficient and accumulate lower levels of carotenoids and chlorophyll compared to wild type. PAC is probably involved in chloroplast mRNA maturation. Three alternative transcripts of this gene exist. |
| Alias | [PAC][PALE CRESS] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg475310 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 11.4891 |
Ahg473708 | isopropylmalate dehydrogenase 1 |
| 15.2315 |
Ahg904129 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
| 15.7162 |
Ahg493377 | cytochrome P450, family 97, subfamily B, polypeptide 3 |
| 23.622 |
Ahg470810 | ribosomal protein S15A |
| 24.7386 |
Ahg485766 | Ribosomal protein L36e family protein |
| 24.98 |
Ahg487223 | Galactose oxidase/kelch repeat superfamily protein |
| 25.4558 |
Ahg931037 | |
| 30.4959 |
Ahg493124 | Hyaluronan / mRNA binding family |
| 33.541 |
Ahg474095 | RNA-binding protein 47A |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|