| Annotation |
|---|
| Description | jgi|Araly1|473708|fgenesh2_kg.1__3662__AT5G14200.1 |
| Sequence |
ATGGCGGCGT TTTTGCAAAC TAACATGACT CTGGATTCGA TCAAGATCGT CCCGGGAAGA TACAGTTCTC TCACCGATCG TGCGCCGTAT CGAATTAGGT GCGCCGCCGC TTCACCGGTG AAAAAACGGT ATAACATCGC TCTGCTTCCC GGCGATGGTA TCGGTCCCGA AGTTATATCT GTTGCTAAGA ATGTGCTTCA GAAAGCTGGG TTTCTCCAAG GACTGGAGTT TGATTTCCAG GAGATGCCTT TCGGAGGAGC AGCCTTGGAT TTGGTCGGAG TTCCTCTGCC GGAGGAAACT TCCACGGCTG CAAAACAGTC TGATGCCGTT CTTCTTGGAG CTATCGGAGG GTACAAATGG GACAAGAATG AGAAACATCT GAGACCTGAG ATGGGTCTCT TACACCTTCG AAGAGATCTC AAAGTCTTTG CTAATTTGAG ACCTGCTACA GTTTTGCCAC AGCTAGTTGA TGCTTCCACA CTGAAGAAAG AAGTAGCACA AGGTGTTGAT ATGATGATTG TAAGGGAGCT CATTGGAGGT ATTTACTTTG GAGAGCCAAG AGGCATTACC ATCAATGAAA ATGGCGAAGA AGTCGGTGTT AATACAGAGA TCTACGCTGC TCACGAGATT GACAGAATTG CTCGTGTTGC ATTCGAGACT GCTAGGAAAA GGCGTGGCAA GCTGTGTTCT GTCGATAAAG CCAATGTGTT GGATGCATCA ATATTGTGGA GGAAAAGAGT AACAGCTTTA GCCTCTGAAT ATCCAGATGT TGAACTATCG CATATGTATG TCGATAATGC TGCAATGCAG CTTATCCGTT ACCCGAAACA GTTTGACACA ATCGTCACCA ATAACATTTT TGGTGATATA TTGTCTGATG AAGCTTCAAT GATCACTGGA AGCATTGGGA TGCTTCCATC TGCAAGTCTT GGTGAATCGG GACCTGGACT CTTTGAACCT ATACATGGTT CAGCACCAGA TATAGCTGGA CAAGACAAGG CAAACCCATT GGCCACCATT CTCAGTGCGG CGATGCTTCT CAAGTATGGA CTTGGAGAAG AAACGGCTGC AAAGAGGATT GAAGACGCGG TCTTGGATGC TCTGAACAAA GGTTTCAGAA CCGGAGACAT CTACTCCCCC GGAAATAAAC TGGTGGGATG CAAGGAAATG GGTGAGGAGG TTCTCAAATC ACTGGACTCC AAAGTTCCAG CTACTGTTTA AGTTTACTGA TGATTTAAAA AAGTGTGTAG CCCTTGGTTT TACGGTTACT TGTATGCTAA TCCATGTATT AGAAACTGTA GTATTCTAGC TTTTATAATA AATAAAATAT TTGGGATCGA ATTCTGCAAT TTAAAGACAA GATTCTCCAA GAACATTTGA CAAGTCTCCT GCCTCACTTA CCCTGTTCTT GAAGATTGAG AAGTTCTCTC CAACTACAA |
| Length | 1439 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 16870588.. 16872406 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G14200.1 |
| Description | isopropylmalate dehydrogenase 1 |
| TAIR curator summary | The AtIMD1 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. Encodes methylthioalkylmalate dehydrogenase. Involved in glucosinolate biosynthesis, in methionine chain elongation. |
| Alias | [ATIMD1][IMD1][ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 1][isopropylmalate dehydrogenase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg482793 | Protein of unknown function (DUF3411) |
| 6.7082 |
Ahg486210 | adenylosuccinate synthase |
| 11.1803 |
Ahg484328 | Amidase family protein |
| 11.4891 |
Ahg484005 | pale cress protein (PAC) |
| 12.49 |
Ahg478976 | Plasma-membrane choline transporter family protein |
| 18.7083 |
Ahg478940 | |
| 19.2354 |
Ahg475111 | O-fucosyltransferase family protein |
| 19.2614 |
Ahg494787 | Chaperone DnaJ-domain superfamily protein |
| 22.2935 |
Ahg315892 | Zim17-type zinc finger protein |
| 25.6125 |
Ahg909633 | Ribosomal protein L30/L7 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|