Detail



ID : Ahg484023

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484023|fgenesh2_kg.5__15__AT2G01170.1
Sequence
AAAAATAAAT ATCTCATCTG AATCAGAGAG AGAGATGGGC GGCGATCAAT CCTTCTATGT TCCCGCCATG GATTCCGGCC AAGTCCGCCT CAAGGAGCTC GGCTACAAGC AAGAGCTCAA GCGCGATCTC TCGGTCTTCT CCAATTTCGC CATCTCCTTC TCCATCATAT CGGTGCTCAC TGGTATCACC ACCACCTACA ACACCGGCTT GAGGTTCGGC GGCACCGTCA CTCTGGTCTA CGGATGGTTC CTGGCCGGCT CCTTCACAAT GTGTGTTGGG TTATCGATGG CCGAGATCTG CTCCTCTTAC CCTACCTCCG GCGGTCTCTA CTACTGGAGT GCTATGCTCG CCGGCCCTCG TTGGGCTCCT CTTGCCTCTT GGATGACCGG CTGGTTCAAC ATCGTTGGTC AGTGGGCAGT GACGGCCAGC GTTGACTTCT CTCTCGCACA GCTGATTCAG GTCATCGTCC TTCTCTCCAC CGGCGGTCGA AACGGCGGCG GATATAAAGG ATCAGACTTT GTTGTGATTG GCATCCATGG TGGGATCCTC TTCATCCATG CTCTTCTCAA CAGCCTCCCC ATCTCCGTCT TGTCTTTCAT TGGACAGCTT GCTGCTCTCT GGAATCTCCT CGGGGTTTTG GTGCTCATGA TTCTGATTCC TTTGGTTTCT ACGGAAAGAG CCACCACTAA GTTTGTCTTC ACCAATTTCA ACACTGATAA TGGCCTTGGC ATCACCAGCT ACGCTTATAT ATTCGTTTTG GGGCTCCTCA TGAGCCAGTA CACCATTACA GGGTATGATG CATCTGCCCA CATGACAGAG GAGACGGTCG ACGCAGACAA GAACGGGCCA AGAGGAATAA TCAGTGCAAT TGGTATATCA ATTCTGTTTG GATGGGGTTA CATATTAGGC ATAAGCTATG CGGTCACAGA CATACCTTCT CTTCTGAGTG AGACCAACAA CTCTGGTGGG TATGCCATTG CTGAGATCTT CTACTTAGCT TTCAAGAATC GGTTTGGGAG CGGTACTGGT GGAATCGTGT GCTTAGGTAT TGTTGCGGTT GCTGTATTTT TCTGCGGCAT GAGCTCTGTC ACCAGCAATT CCAGGATGGC TTATGCGTTT TCGAGAGATG GAGCGATGCC AATGTCGCCG TTATGGCACA AAGTGAACAG CAGAGAGGTC CCCATTAATG CGGTTTGGCT CTCTGCTCTC ATATCATTTT GTATGGCCCT TACCTCACTG GGGAGCATAG TGGCGTTCCA AGCAATGGTG TCGATAGCAA CGATTGGACT GTACATAGCA TACGCAATCC CGATTATTTT GAGAGTGACG CTTGCTCGCA ACACCTTCGT GCCTGGACCA TTCAGCCTGG GGAAGTACGG AATGGTAGTC GGATGGGTGG CAGTCATGTG GGTTGTAACC ATATCAGTCC TCTTCTCCTT GCCCGTGGCA TATCCCATAA CCGCGGAGAC ACTCAACTAC ACTCCGGTGG CAGTGGCTGG TTTGGTAGCC ATAACCCTCT CATATTGGCT TTTCAGTGCC CGGCACTGGT TTACGGGTCC CGTCTCCAAC ATTCTTAGCT GAAACAAATC GTTGGGGAGT AAAGCCATTC TTAGCTCATA CAACTAGCAA CAACATCTCA CATTTTTATT TCATCATCAC AACTCTAAAC TTTAAACCAA TGGAATGATA ATAATCAACA CAAAGTGTTG GCATGGGC 
Length1718
Protein Sequence
Protein Residue
Map Locationscaffold_5: 112833.. 115250
Download Sequence
A.thaliana
AGI-codeAT2G01170.1
Descriptionbidirectional amino acid transporter 1
TAIR curator summaryEncodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Alias[AtGABP][BAT1][GABP][bidirectional amino acid transporter 1][GABA permease]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg938922 glucan synthase-like 11
7.93725 Ahg475653 LETM1-like protein
14.2127 Ahg473467 RING/FYVE/PHD zinc finger superfamily protein
18.4932 Ahg473932
22.6495 Ahg471081 ATP phosphoribosyl transferase 2
23.4947 Ahg490606
24.7992 Ahg486257
29.1548 Ahg320206 cyclic nucleotide-gated channel 6
32.9848 Ahg474695 isocitrate dehydrogenase
33 Ahg475328 aminophospholipid ATPase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression