Detail



ID : Ahg475653

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475653|fgenesh2_kg.2__783__AT1G65540.1
Sequence
ATGGCTTCAA GAGCGCTTCT TCGAAGGAGA AGTTACGATG TCGTCAAATC TCTAAGTGAA CATTTGCCTA CAATTCAATG TCTTTCAAGT ATTGAGCGGC AAGGACAGCG GGGATATGAG AACATTACTT CAGGATATGT ATCTGGAAAA CGTGATTTTA AAGATGTCAA GAATAAAGAG TCGACCGGGT TATTGGAGGG GTTCTATACA AGTAGATTAC TTCAGTCTCC AAATTTTAGT AATGGAGTTG GAAGATTAGA ATTCCCTTAT CCTTTGGGAT ATAGATTGGT TCGACAATCT ATGTACTCCT CTTTGGCAAC GGCTAACAAG CCTGACCATG ATAAAAAGGG AGAAAAGGTT ACTTTGCAAA CCAAAGAAGC TTCTCCTGAG GAGTGTGATG AAGCTGTTGA GGGATTGAGT TTGGCTAAGG CTAAAGCTAA AGCCATGAAA TTGGAAGAAT CACAGAAATC TGATATATCC ATTATGCAAC GTGTGCGGTC GTTTCTTCTG GGAATAGGTC CTGCTTTGAG AGCTATTGCA TCGATGAGCA GGGAAGATTG GGCTAAGAAG CTTCGTCACT GGAAAGATGA ATTTAAATCT ACTCTCCAAC ACTACTGGCT GGGGACAAAG TTGCTCTGGG CTGATGTCAG GATCAGTGTA AGGCTGCTTG TTAAACTTGC TAATGGAAAA GGTCTCTCTA GGAGGGAACG ACAACAACTC ACTCGAACAA CTGCCGACAT TTTTAGATTA GTCCCGGTTG CAGTTTTCAT TATTGTTCCA TTCATGGAGT TCTTGCTACC GGTATTTCTT AAGCTGTTCC CAAACATGTT GCCGTCAACT TTCCAGGACA AGATGAAAGA AGAGGAGGCT CTAAAAAGAA GGTTGAATGC AAGAATGGAG TATGCTAAGT TTCTCCAAGA TACTGTTAAA GAAATGGCAA AGGAAGTCCA AACCTCTCGC AGTGGGGAGA TAAAAAAGAC TGCAGAAGAT CTTGATGGAT TTATGAACAA GGTCAGAAGA GGAGTTGGTG TTTCAAATGA TGAAATTTTG GGATTTGCAA AGCTCTTCAA TGATGAGCTT ACATTGGATA ACATTAACAG GTCTCGATTG GTAAATATGT GCAAATACAT GGGTATTAGC CCATTTGGAA CTGATGCATA TTTGCGTTAT ATGCTTCGGA AAAGATTACA GGAGATTAAA AAGGATGATA AGTTGATCAA GGCTGAAGGT GTGGAGTCTC TCTCAGAAGC TGAACTTCGC CAAGCTTGCA GAGAGAGAGG AATGCTTCAA TTGGGTTCAG TTGAAGAAAT GAGAGAGCAG CTAATTGACT GGCTGGATTT ATCTCTTAAC CATTCGGTAC CATCATCCCT CTTAATTCTT TCTAGGTCAT TTTCAATGGC TGGGAAACTC AAGCCAGAAG AGGCTGTTCA AGCTACTCTC TCCTCTCTGC CAGATGAGGT TGTGGACACT GTTGGGGTTA CAGCTCTTTC ATCAGAAGAT TCTGTATCAG AAAGAAAGAG GAAGTTAGAA TACCTTGAAA TGCAAGAAGA ATTAATCAAG GAGGAGGAGG AAGAAGAAGA GGAGGAAATG GCAAAGATGA AAGAGTCTGC TTCAAGCCAA AAAGATGTAG CTTTGGATGA GATGATGGCA TCTACAGCTA AAGATGCTAA TGAGCAAGCG AAAGCGAAAA CTCTTGAGAA ACATGAGCAG CTTTGTGAGC TCAGCCGTGC ATTGGCTGTT TTGGCTTCCG CATCTTCTGT TAGTATGGAG CGTGAAGAGT TCCTGAAACT AGTTAAAAAA GAGGTAGATC TATACAACAG CATGGTAGAG AAAGGTGGCA CAGATGATGA GGAAGAGGCT AGGAAAGCTT ATTTAGCTGC TCGAGAAGAT AGTGACCGAA GTGCTCAGAA AGCTATTGCT GATAAAACTT CTTCTGCACT GTTAGATAGG GTGGAGACAA TGCTCCAGAA ACTTGAAAAG GAAATTGATG ATGTCGATAA CAAGATTGGC AACCGCTGGC GACTCCTGGA CAGAGATTAT GATGGAAAGG TAAGTCCAGA TGAGGTAGCA TCGGCTGCGA TGTACTTGAA GGATACATTG GGCAAAGAGG GTATCCAAGA GCTTATCCAA AACCTTTCTA AAGATAAAGA TGGCAAAATA CTGGTGGAAG ATTTAGTGAA GTTAGCGAGT GAGATTGAAG ATGCTGAAAC TGAAGAGACA GACGAGCCTA CTACCAAGTC TTGA 
Length2244
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9083088.. 9087600
Download Sequence
A.thaliana
AGI-codeAT1G65540.1
DescriptionLETM1-like protein
TAIR curator summary
Alias[AtLETM2][LETM2][leucine zipper-EF-hand-containing transmembrane protein 2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg929867 pre-mRNA-processing protein 40B
6.63325 Ahg491382 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
6.7082 Ahg478222 mRNA capping enzyme family protein
7.2111 Ahg914615 Dihydrolipoamide acetyltransferase, long form protein
7.93725 Ahg484023 bidirectional amino acid transporter 1
8.48528 Ahg493797 Pectin lyase-like superfamily protein
12.8452 Ahg484547 Sucrase/ferredoxin-like family protein
13.2665 Ahg486488 DYNAMIN-like 1E
14.4914 Ahg926406 Protein of unknown function, DUF593
15.2315 Ahg931204 vaculolar sorting receptor 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression