| Annotation |
|---|
| Description | jgi|Araly1|484340|fgenesh2_kg.5__332__AT3G25780.1 |
| Sequence |
TAAAACCAAA TCTCAATCTC TTCTTAAAGT CTTCTTGATC AATGGCTTCT TCTTCTGCTG CTATGTCTCT CGAATCTATC TCTATGACAA CTCTCAACAA TCTCTCCCGT AATCATCAAT CTCATAGAAG CTCTCTTCTT GGTTTCTCAA GATCTTTCCA AAACCTTGGG ATCTCATCTA ACGGTCCAGA TTTCTTCTCC CGATCAAGAT CTACTACTTC CAAGAACCTC AACGTTACTC GAGCTTTCTT CTGGAATTGG GGCAAGAAGA CTGAAAACTC CAGACCAAGT AAGATCCAAG AACTAAACGT GTACGAGCTA AACGAAGGAG ATAGAAACAG TCCAGCAGTT CTTAAACTCG GCAAAAAACC AACAGAGCTC TGTCTCGGCG ATCTTGTACC ATTCACCAAC AAACTCTACA CCGGCGATCT CAAGAAACGC GTCGGAATCA CAGCAGGTCT CTGCGTCTTG ATCCAACACG TTCCGGAGAA GAGCGGTGAC AGATTCGAAG CTAACTACAG CTTCTATTTC GGTGACTATG GTCACTTGTC TGTACAAGGA CAGTACCTGA CTTACGAAGA CACGTTTCTC GCTATCATTG GTGGTTCAGG AATCTTTGAA GGTGCGTACG GACAGGTTAA GCTTCGTCAG CTTGTGTATC CGACAAAACT GTTCTACACT TTTTACCTTA AAGGGTTGGC TAATGATTTG CCGCTGGAGC TAACTGGAAC GGTGGTTACG CCGTCGAAAG ATGTGAAACC GGCGCCGGAA GCTAAGGCGA TGGAGCCTAG CGGAGTTATT AGTAACTTTA CTAATTAAGT AAATTAGTTG TGTGTTTTTC TCTTGTTTTG TAATCGAATC TTTTGATGAG TTGTGTGAGG GAATAAAGTA TTTATTTTGA CGTGACTTTA TTGATTACGA CTGGTCTTTC TACAACGTGG AATTGTTGTA CTCG |
| Length | 954 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 2313823.. 2315410 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G25780.1 |
| Description | allene oxide cyclase 3 |
| TAIR curator summary | Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884. |
| Alias | [AOC3][allene oxide cyclase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.78233 |
Ahg477161 | WRKY DNA-binding protein 40 |
| 7.07107 |
Ahg484885 | farnesoic acid carboxyl-O-methyltransferase |
| 11.4891 |
Ahg471947 | lipoxygenase 3 |
| 12.49 |
Ahg481911 | Protein phosphatase 2C family protein |
| 12.9615 |
Ahg312706 | jasmonate-zim-domain protein 5 |
| 13.3041 |
Ahg472978 | salt tolerance zinc finger |
| 14.3178 |
Ahg944463 | redox responsive transcription factor 1 |
| 16.6132 |
Ahg473051 | ERF domain protein 11 |
| 19.975 |
Ahg489075 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 22.2711 |
Ahg483808 | ABA-inducible BHLH-type transcription factor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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