Detail



ID : Ahg484417

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484417|fgenesh2_kg.5__409__AT3G26520.1
Sequence
TATATATACG TACAACACAT AAGAAAACCA AACCAATCTC TTCACTCTCT CTTAATCAAA AGCTTTTAAC CTCAGCCGTT AAATCTTTGT CCGATCATGC CGACCCGAAA CATCGCCATT GGTGGAGTCC AAGAAGAGGT CTATCACCCC AACGCACTTA GGGCGGCGCT CGCTGAGTTT ATCTCGACTT TGATCTTCGT CTTTGCCGGA TCAGGCTCCG GAATTGCTTT CAACAAGCTG ACTGACAATG GAGCCACCAC TCCTTCCGGC CTCGTCGCCG CTGCCTTAGC TCATGCTTTC GGTCTCTTTG TCGCTGTTGC TGTCGGCGCT AACATTTCCG GTGGCCACGT TAACCCTGCC GTTACCTTCG GTGTCTTACT CGGTGGTAAC ATCACTCTCC TCCGTGGTAT TCTCTACTGG ATTGCTCAGC TTCTTGGCTC CGTCGCCGCT TGTTTCCTCC TTAGCTTTGC CACCGGTGGC GAGCCAATTC CAGCGTTCGG TCTCTCTGCC GGAGTAGGAT CATTGAACGC TCTCGTCTTC GAAATCGTGA TGACCTTCGG GCTCGTCTAC ACCGTCTACG CCACAGCCGT TGACCCCAAG AAGGGTAGTC TCGGAACAAT CGCACCAATC GCCATAGGTT TCATTGTTGG AGCTAACATC CTCGCCGGTG GAGCTTTCAG CGGAGCCTCC ATGAACCCAG CCGTTGCTTT CGGACCAGCC GTCGTAAGCT GGACATGGAC CAACCACTGG GTTTACTGGG CTGGTCCTCT TGTTGGTGGT GGACTCGCCG GAATTATCTA CGATTTTGTC TTCATCGATG AAAATGCCCA CGAGCAATTG CCAACCACCG ATTACTGAAG ACGTCAAATT CAATTGTTGT TAATCTGATG AATTTTTCGT GATTTTGTTT TTTAATTTCG CATCGTAATG GGTTTCTGGC CGTTGGATCT TTTTTAGATG AATCTTTGTC TGTTGATTTG TGTCTTTGGG TTTGTTGTTG GAGTTGTAAT ATTCCTGGAA GGCTTTTGTG CAATTGTATT GTACGGTTTA ATAACTTTTA ATTGAGAAAA CCAGGGACTG TGTGAATTAT GAAAATGAAT TTTTTTTTTT TTGTTTATTT TACTTAAAGA ACCGTAGCTA ATTTAGATCA TAATTTAAGA GA 
Length1162
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2749231.. 2750896
Download Sequence
A.thaliana
AGI-codeAT3G26520.1
Descriptiontonoplast intrinsic protein 2
TAIR curator summarygamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.
Alias[GAMMA-TIP2][SITIP][TIP1;2][TIP2][SALT-STRESS INDUCIBLE TONOPLAST INTRINSIC PROTEIN][tonoplast intrinsic protein 2]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg483684 FASCICLIN-like arabinogalactan protein 8
5.83095 Ahg486137 dicarboxylate diiron protein, putative (Crd1)
7.74597 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
8.42615 Ahg491143 plasma membrane intrinsic protein 3
9.16515 Ahg483921 Tetratricopeptide repeat (TPR)-like superfamily protein
9.69536 Ahg474626 photosystem I subunit G
10.6301 Ahg950218
12.1244 Ahg489446 thioglucoside glucohydrolase 1
12.6491 Ahg947488 beta-1,3-glucanase_putative
13.5647 Ahg926353 polygalacturonase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression