Detail



ID : Ahg484418

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484418|fgenesh2_kg.5__410__AT3G26540.1
Sequence
ATGTCAGTGA CCGGAGTTTC TTCTGCTTTT GGCCGTCTTT TCAAACATGA TAAAACCCAC AAGCGTGTTA TCGCTACACG ACCCAAATTT ACAGTGACCC GTCAGATTCT TGAGCACCTT GAAGGCGGTA ATGTTTCGAA AGCTGTCTCT GTTCTCTTTG CTTCTCCAGA GCCAGTTGGG TATTGGCTAT ACGAGCGTCT TTTCCGTTCT TGTTCCTCGA AATCTCTTGT TGTGCAAGCC CGTAAAGTCC AATCCCATTT AGTAACTTTC TCTCCGTTGC CTCCGAGTTT CCTCTTGAAT AGAGCTATTG AGGCTTATGG GAAATGTGGG TGTGTTGATG ATGCACGGGA ACTGTTCGAG CAAATGCCTG AACGAGATGG TGGTTCTTGG AACGCTGTGA TTACTGCTTG TGCGCAAAAT GGCGTCTCGG ATGAGGTATT TCGTATGTTT CATAGGATGA ATAGAGATGG AGTACGAGCT ACGGAGACTT CTTTTGCTGG TGTTTTAAAG TCATGTGGTT TAGTCTTGGA CCTGAGATTA TTGAGGCAGC TGCATTGTGC TGTGGTGAAG TATGGGTATT CGGGAAATAT AGATTTGGAA ACTTCGATTG TTGATGTTTA TGGGAAGTGT CGGGTTATGA GTGATGCGAG AAGAGTTTTT GATGAGATTG TAAACCCTAG TGATGTTTCA TGGAATGTGA TTGTGCGGCG GTATCTTGAG TTGGGTTTTA ATGATGAGGC AGTGGTAATG TTTTTCAAGA TGTTAGAGTT GAATGTTCGA CCTTTGAATC ACACGGTTTC TAGTGTAATG TTAGCTTGTT CAAGATCCCT GGCCCTTGAG GTGGGAAAGG TAATCCACGC CATTGCTGTC AAAATTAGTC TTGTGGCAGA TACAGTTGTT TCTACTTCTA TATTTGATAT GTATGTAAAA TGTGATAGAT TGGAGAGTGC TCGCAGAGTA TTTGACCAAA CCAAATCTAA AGATTTGAAA TCTTGGACTT CGGCGATGTC GGGATATGCA ATGAGTGGTA TAACTAGAGA TGCAAGGGAG CTCTTTGATT TGATGCCTGA ACGGAATATA GTCTCATGGA ACGCAATGTT GGGCGGATAT GTACGTGCCC ATGAATGGGA TGACGCACTG GATTTTCTCA CTTTGATGCG CAAGGAGATT GAAGATATTG ATAATGTCAC TCTTGTGTGG ATCCTAAATG TCTGCTCAGG TATATCAGAT GTTCAAATGG GAAAGCAAGC TCATGGTTTT ATCTACCGAC ATGGATATGA TACAAATGTA ATTGTAGCCA ATGCACTTCT TGATATGTAC GGAAAATGCG GTACCTTGCA TAGTGCCAAT ATTTGGTTCC GCCAAATGAG TGAACTAAGG GATGAGGTTT CATGGAATGC TTTATTGACT GGTGTAGCTC GAGTTGGCAG GAGTGAACAA GCCTTATCTT TCTTTGAAGG GATGCAAGTG GAGGCCAAAC CTAGCAAATA CACACTCGCA ACGCTCTTAG CAGGGTGTGC AAACATTCCT GCATTAAATT TAGGCAAAGC AATCCACGGG TTCCTGATTA GAAATGGCTA TAATATTGAT GTTGTTATAC GGGGTGCTAT GGTTGACATG TATTCCAAAT GCCGATGTTT CGACTATGCT ATTGAAGTAT TCAAAGAGGC AGCTACACGG GACTTGATTC TATGGAACTC TATTATCTGT GGATGTTGTC GTAATGGAAG AAGCAAGGAG GTCTTTGAGT TGTTCATGCT TTTGGAAGAT GAAGGAGTTA AGCCTGACCA TGTCACCTTT TCGGCCATTT TACAAGCTTG CATACGTGAA GGTCATGTCG AACTCGGTTT TCAGTATTTC AGTTCTATGA GCACCAAATA TCTTATATTA CCACAGATTG AGCATTATGA TTGTATGGTA GAACTCTACT GCAAGTATGG ATGCTTGCGT CAGCTTGAAG AATTTCTCCT CTTGATGCCT TTTGATCCAC CTATGCAAAT GTTGACAATG ATAAATGATG CTTGCCAAAG ATACCGCTGG TCAAAGTTAG GAGCATGGGC TGCTAAACGG CTTTATGAAT GA 
Length2082
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2764396.. 2766477
Download Sequence
A.thaliana
AGI-codeAT3G26540.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg922785 conserved peptide upstream open reading frame 19
34.8568 Ahg941039
36.3318 Ahg935201 P4H isoform 1
43.589 Ahg357440 C2H2-like zinc finger protein
52.0961 Ahg495713
57.4456 Ahg482628 ENTH/VHS family protein
74.4177 Ahg490864 LOB domain-containing protein 39
89.2468 Ahg491314
98.7421 Ahg938039 Protein of unknown function (DUF688)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression