Detail



ID : Ahg484485

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484485|fgenesh2_kg.5__477__AT3G27000.1
Sequence
CAAGTAGAGA AGAGTGATTC TTCGCTTCGA TTCAAAGACA AGTTTTTCTT TTGTTCCCTG AGAGATCGAA TCGAAGAAAT CTGATTGTTG TAATTCGATA AAAATCTGAA ATTTCTATAG AAAATCGGAG GAGATGGACA ACAAAAACGT CGTCGTTTGC GACAACGGCA CCGGTTATGT GAAATGTGGA TTTGCTGGAG AGAATTTTCC AACATCTGTT TTCCCCTGTG TCGTGGGAAG ACCGTTGCTT CGGTATGAAG AATCACTCAT GGAGCAGCAA GTCAAGGATA TAGTTGTTGG GGAGACTTGC TCTGAGCTTC GACATCAATT GGATATAAAT TATCCTGTCC ATAATGGTAT TGTGCAGAAT TGGGAGGATA TGGAACATGT TTGGGATCAT GCTTTCTATA ACGAATTGAA AATCAATCCA TCAGAGTGTA AGATATTGCT CACAGATCCA CCTCTTAATC CCTCCAAGAA TCGTGAAAAA ATGATTGAGA CAATGTTTGA GAAATACAAT TTCGCTGGCG TTTTCATTCA AATCCAAGCC GTTTTGACTC TCTATGCTCA AGGTTTGCTA ACTGGTTTGG TTATTGATTC TGGTGATGGT GTTACTCATG TGGTTCCGGT GGTTGACGGC TACTCGTTCC CTCATCTTAC CAAAAGAATG AATGTCGCTG GCAGACACAT AACAGCATAT CTCGTTGATC TACTATCTCG ACGAGGATAT GCGATGAATA AAACGGCTGA CTTTGAGACG GTTAGGGAAA TTAAAGAGAA GCTCTGCTAT ATAAGTTATG ATTACAAGAG AGAATCTCAG CTTGGCCTTG AGACAACCAT CCTTGTTAAG AATTATACTC TTCCAGATGG GAGAGTCATA AAAGTAGGCA CTGAAAGATT CCAAGCACCT GAAGCGCTGT TTACACCGGA ACTCATTGAT GTTGAAGGTG ATGGAATGGC AGACATGGTT TTCCGCTGTA TTCAAGAAAT GGATATTGAT AACCGCATGA TGCTCTACCA ACACATAGTT TTAAGTGGAG GAAGCACCAT GTACCCAGGA TTACCTAGCC GTCTTGAGAA AGAAATCCAG GATCGGTATC TCGACACAGT TCTAAAAGGA AACAAAGATG GCTTAAAGAA ACTCAGATTG CGGATCGAAG ATCCACCGAG GAGGAAACAC ATGGTATACC TCGGAGGTGC TGTTCTTGCA GGAATCATGA AGGACGCACC AGAGTTCTGG ATCAATAGAG AAGACTATAT GGAAGAAGGA ATTAATTGTT TGAATAAAAT GAGCCAAGCT TAAAACTTTC AAAAGCAAAA CTCATTTTTT ATTACCGTCA GGATGATTTA ATTCCGTTTG TGAATCAGTA TTTTAGGTTT CAAAGTTTGA GAAGAATTGG TTGCGATTAG GAATCCAAAA TACA 
Length1424
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3138278.. 3140769
Download Sequence
A.thaliana
AGI-codeAT3G27000.1
Descriptionactin related protein 2
TAIR curator summaryencodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. its transcript level is down regulated by light and is expressed in very low levels in all organs examined.
Alias[ARP2][ATARP2][WRM][actin related protein 2][ACTIN RELATED PROTEIN 2][WURM]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg329122 zinc finger WD40 repeat protein 1
8 Ahg321788 Chaperone DnaJ-domain superfamily protein
8.48528 Ahg484397 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
18.1108 Ahg942127 CTC-interacting domain 6
24.4949 Ahg909175 Transcription initiation factor IIF, beta subunit
27.3496 Ahg330259 COP1-interacting protein 4.1
37.5233 Ahg482005 Pleckstrin homology (PH) domain-containing protein
37.7492 Ahg474214 electron transfer flavoprotein alpha
38.1445 Ahg493617 DENN (AEX-3) domain-containing protein
39.37 Ahg491138 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression