Detail



ID : Ahg950866

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950866|scaffold_802753.1
Sequence
ATTTTGTCTG AACGGCATCT ATGGCTGCTC TGGTGCTTTC ACTTCTCCTT CTAGCCATGG CTGGACATTC TAGTGCGTCA TGGTGTGTGT GTAAAACAGG ACTGAGTGAT ACAGTTCTTC AGGGAACCCT AGACTATGCG TGTGGAAATG GAGCAGATTG TAATCCTACT AAACCAAAAC AATCTTGCTT CAACCCTGAC AATGTTAGGT CTCATTGCAA CTATGCAGTC AATAGCTACT TCCAAAAGAA GGGTCAATCT CCTGGCTCTT GTAATTTCGA TGGCACTGCC ACTCCCACTA ACTCCGATCC CAGTTATACA GGGTGTACCT TTCCTACTAG TGCCAGTGGC TCTAGCGGCA GCACGACTGT GACACCTGGC ACAACCAATC CAAAAGGCAG CTCAAGCACC ACCACACTTC CTGGTAGTGG TACCAACAGT CCTTATTCAG GGAACCCAAC CAATGGAGTT TTTGGGGGCA ATAGCACAGG AGGCACCACT GGGACAGGGA TTAATCCGGA TTACACAACA GAAAGCAGCG CGTTTGCTCT CAAGAACTCA AGCAAATTGT TCGTCTGCCT TCTCTTTGTC GCTTCGAGTG GATTCTGTTC TTTCTTGATG CTCTAAGGAT GTTAATGGTC TCTGGT 
Length646
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18667605.. 18669741
Download Sequence
A.thaliana
AGI-codeAT5G61130.1
Descriptionplasmodesmata callose-binding protein 1
TAIR curator summaryEncodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.
Alias[AtPDCB1][PDCB1][plasmodesmata callose-binding protein 1]
Gene coexpression
MR
MR Locus Description
14.6629 Ahg480193 O-Glycosyl hydrolases family 17 protein
16.1245 Ahg484589 Leucine-rich receptor-like protein kinase family protein
17.3205 Ahg947488 beta-1,3-glucanase_putative
18.1659 Ahg496451 tubulin beta chain 2
22.0907 Ahg933364 expansin A6
25.04 Ahg473597 2-oxoacid dehydrogenases acyltransferase family protein
29.5804 Ahg945946 SKU5 similar 4
32.0936 Ahg480012 endoplasmic reticulum retention defective 2B
33.3467 Ahg929671
35.4965 Ahg356177 methyl esterase 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression