Detail



ID : Ahg484697

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484697|fgenesh2_kg.5__689__AT3G29270.2
Sequence
GCAGAATCGA ATCGGTACGA ATCTTTATCT TTGATTGCTC TCTCCTTTCA ATTATCTATC TGGGTTCGAT TTCTTCGTTA GCTGCTTAAT TTTCTGATCG ATTATCTCAT TTAGTGAATT TTGATTCTAG GGTTTTCTCT TCTCTCCATT AATCTTATAT TGGGATCTTC TAAATCGGAT AAAGTCATAA CCTTTAGTTA GATAAAGGAA TCGTCTTTAT TGCTTAAAAT GATCGAGCTT TAGGTCTAAT ACATGTCAGA GAATTTGAAT TCGATCCTGA GCATAAAAAT TGAAACTTTC TATATAGAGG TTGCTTAATC ATTTGTGCTG CCTTGTTTGC TCAATGTAGC ACTAAGTCAG AGTCTTAATA GTGGATACTG AAATAGAATC GGTGTAACCT TTGAGTAGAT TGAGCTCAAA GATAAAAGAG TCGTCTTTAG TACTGAAATG ATTGAGCTTT AGGTCTAACA CATGTCGAAG CGTTTGAATG TATTGATTCT GTTCATAAAA ATTGAATCTT GCTATATCGA GGTTGCTTAA TCATTTGTGT TGCGATGGTT GCTCAATGTA GCAGTATTAT TAGTTGATAC TGAAATAGAA GGATTAATAA ATGTGTTCTC TTTGCTTGTT TTAGTATGAA GCGATGAAGC ATCGAGTTTG GTGTTCATGA AGCTCAGAGT TAAGTATTAG CAGAAACAAG GTATTCATGT TATCCATTCC TGATACCAGA ATGTGGAATT TAGCATCGAG TTATCTTACG GGAAACATTG GACCGAAAAA CGAAATAAGA AGACCAGTTC ATGCTCATGC GGAGTGTTCA GATGACGATG CATCTTCTGT AGGCAGTAAA GACGAAGGTC TTGAGTGTCC TATTTGTTGG GAATCATTTA ATATAGTTGA AAACGTTCCT TACGTGTTAT GGTGTGGACA CACGATGTGT AAAAACTGCA TTTTAGGACT TCAATGGGCT ATTGTGAAAT TACCTACTCA CCCGGTTCAG CTTCCTCTCT TCATTTCATG CCCCTGGTGT AACCTATTGT CCTTCCGTCT GGTATTCAGA GGAACACTCA GATTTCCTCA CAAGAACTAC TTTGTGCTTT GGATGGTTGA GAGGATGAAT GGCGAAAGAC GCAACTCACC CGTTATAGCA CAAAACGATG GGAACAATGA CCATACAAGA GAAACTCCAT CTCCATGTCT CCACAATCGC CATCATCGCA GTCAACCTGA ACCATCACGT TCTGTTAATG ATCATCGCAT TCCCAGGGAC AACATACAAA CTTCACTGAG GAAGTCTCTG GTTTTCTTTG TCCAATTGAC AGCAAAGTTC CCATTGGTTG TCATATTCTT GCTGATAATA CTCTATGCAA TACCGACAAG TGCAGCCATA TTGGCGATGT ACATTCTAGT CACTCTCTTG CTGGCTCTAC CGTCGTTTCT CATCCTCTAC TTCGCCTATC CTTGTCTTGA CTGGCTTGTC CGAGAGATTG TCACATGAAC TTTCTAAGGA TGCGTTCAGA AACTTCCCAT TCCTAATTTG ACGACTTTTC TTCAACAACT GAGACCCAAG ATCGGTCCGT CCTTCATGTA AGTATAACAA TTTCGTAATT ACCGTCTACC TTATTGATAT ATGGATGTAG TTATGGATTG CATTGTTGCT CTATGGAAGC TGGACGCATG TGTTGTAAGG GCTATTGCAG AAACTTATTA GTATTCTACT ATTTGAGGAT TTGTTTGTGA TTGTTTGAGG TTTTGTCTCA ATAAGATTTG TGTATATAAA GTTTATGCAC TGTTATT 
Length1797
Protein Sequence
Protein Residue
Map Locationscaffold_5: 5255460.. 5257388
Download Sequence
A.thaliana
AGI-codeAT3G29270.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.91608 Ahg938326 O-fucosyltransferase family protein
6.7082 Ahg473569 Pseudouridine synthase family protein
13.7477 Ahg482244 receptor like protein 27
15.0997 Ahg352131 ubiquitin-specific protease 10
24.6982 Ahg488210 ELCH-like
25.04 Ahg929017 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
25.1396 Ahg488832 RING/U-box superfamily protein
25.2982 Ahg495822 Pentatricopeptide repeat (PPR) superfamily protein
32.3265 Ahg476035 Chaperone DnaJ-domain superfamily protein
35.242 Ahg930194 IQ-domain 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression