Detail



ID : Ahg352131

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352131|fgenesh1_pg.C_scaffold_6002724
Sequence
ATGACGATCC CTAATTCCGA TTTCATGATT GAAAACGGAG TCTGTGATTT TCCGACTACT CCTGCCGAAG AGAAACGTAT TGTATCGGAG CTGATTACCG AATCGGAAGA TAATTTGAAA GAAGGAAACT TGTATTTTGT CATCTCTAAA AGGTGGTATG CAAGCTGGCA GAAATATGTT GAGCAATCGA CAGATGAATG TATAAGTGGG GAGTCCTCGA GGCCTGGAGC GATTGATAAC CATGATATTA TCGAAAGTGA AAGCGACGCG AATGATCCAC AGCTTCGTAG ATTGTTGGTG GAAGGGGTTG ACTACGTTTT AGTTCCTCAA GAAGTCTGGA AAAGACTTGT TGAATGGTAT AGCGGAGGTC CTCCGATAGA AAGGAAGTTG ATCTGTCAAG GCTTTTATAG TAGGAGTTAT AGTGTAGAGG TTTACCCACT CTGCCTTATG TTGACAGACG GACGAGATGA GAGTAGAACT ACAATACGGT TGGGAAAACA AACCTCTATA AGGGAACTTT GTGAGAAGGT TTGCACTATG ACAGGGGTAG CGCAAGAAAA GGCTCACATA TGGGATTATT TCCATAAGAG GAAAAACGGA CTCTTGGATC CTTCATCTAA CAAGAGCCTG GAAGAGTCTA GCCTTCAGAT GGACCAAGAT ATTCTTCTTG AAGTTGATGG GTCGTCTTCC TCTCAATATG CTATGAGCTC GGCAGGAAAT GAGTTAGCTC TGGTACCTCT GGAACCTTCA AGGTCGCGTG TTACAATTGC TGGGGGGCCT ACCCTATCAA ATGGTCATTC CACTACGTCC AAGTTTAGTC TCTTTCCGAG AATAACTTCT GAAGACGACG GCTGCAATTC TTTGAGTATT CTTGGAAAAG GAGAAAAGGG AGGATTAGCA GGATTGAGTA ATTTGGGAAA TACCTGCTTT ATGAATAGCG CTCTTCAGTG TTTGGCCCAC ACACCTCCAA TTGTTGAATA CTTCTTGCAA GATTACAGTG ATGACATAAA TAGAGATAAT CCTTTGGGAA TGTGTGGTGA GCTTGCTATC GCATTTGGTG ATTTGTTGAA GAAATTATGG TCATCAAGGA ACGCAGTTGC ACCACGCTCT TTTAAGACAA AGTTGGCTAG ATTTGCTCCA CAGTTTAGTG GTTACAATCA GCATGATTCT CAAGAACTGC TTGCTTTCTT ATTGGATGGG CTGCATGAAG ATTTGAATAA GGTCAAACGA AAACCTTACA TCGAACTTAA AGATTCTGAC AGTCGTCCGG ATGATGAAGT TGCTGAAGAG CTTTGGAATT ATCATAAGGC CCGAAATGAT TCTGTAATAG TTAACGTCTG TCAAGTATTC GATTTCTGTC AAGGCCAATA CAAGTCAACT CTGGTTTGTC CAGTTTGCGG AAAAATATCA ATCACTTTTG ATCCCTTCAT GTACTTGTCT GTACCTTTGC CATCAACACT TACGCGATCC ATGACAGTTA CGGTGTTTTA TTGCGATGGA AGTCGTCTTC CGATGCCGTA TACTGTAACA GTGCCTAAAC ATGGATCTAT TAGAGATCTC ATTACCGCAT TAGGTACTGC TTGCTGTCTA GCCGATGATG AGAGCCTATT ACTTGCAGAG GTATATGATC ACAAGATCTT TAGATATTTT GAGAATCCCC TGGAGTCACT GAGTGTGATA AAAGATGATG AGCATATTGT GGCGTATCGG TTAAATCAGA TGCCGAAAGG ATCAGGAAAA GCAAAACTCG AGATTCTTCA TGGAGGGCTG GAAAGGGATG TTCTGGAGAG TGTTAGAGGC AGAGACGTGA AGCTTTTTGG AACTCCTTTA GTGACTTATG TCAACACAGA CCCACTAAGT GGAACTGACA TTGATGCAGT TATCTCTGGA TTTCTGTCAC CTCTGCACAG GGTCCATGCC TCATCTAAGA TTCATAACGG AAGTGACAAT GGCCACCTTG CTGATGCGAC TGCTGACGAA ACATCCGGAA GTTTATCATC CCCAGATACC GAGATAGACG ATGCATCTGA TGGACAGTTA TCCTTCAGGA TATTCTTGAC AGATGAACGT GGTTTGAACT ATAAACCACT TCAGTCTGAA TCTTCTGTGA GCCCGGGTAC AATTACAAGA GTTTTAGTTG AGTGGAATGA GGGTGAGCAT GAAACATATG ATTCCAGCTA CTTGAATGAA CTTCCGGAGG TTCATAAAAC AAGTTTCTCT GCAAAGAAGA CAAGACAAGA AGCGATATCC CTGTTTTCGT GTTTGGAGGC CTTTTTAGCA GAAGAACCTC TGGGACCAGA TGACATGTGG TTTTGTCCGA GCTGCAAAGA ACACAGACAA GCGAACAAAA AGCTAGACCT GTGGAAGTTG CCCGATATCC TTGTGTTCCA TTTAAAACGG TTCACATATA GCAGATATCT CAAGAACAAG ATTGATACGT TTGTGAATTT CCCAATTCAG GATTTAGACT TGAGCAAGTA CGTGAAAAAC AAGAATGGCC AGTCATATCT ATATGAACTA TATGCCATTA GTAATCATTA CGGTGGACTT GGTGGTGGTC ATTACACTGC CTACGCGAAG TTGATTGATG ACAACAAATG GTATCATTTC GATGATAGTC ACGTTTCATC AGTAAATGAA TCTGAAATCA AAAACTCAGC TGCATATGTA CTGTTCTACC GAAGAGTGGG AAGTGAAACA GAGACACAAA CAGCTGAGAT GCCGAGGAGT GATATGGATT AG 
Length2742
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19329037.. 19333451
Download Sequence
A.thaliana
AGI-codeAT4G10590.2
Descriptionubiquitin-specific protease 10
TAIR curator summaryencodes a member of the ubiquitin-specific protease family, UBP10
Alias[UBP10][ubiquitin-specific protease 10]
Gene coexpression
MR
MR Locus Description
4 Ahg935148 RNI-like superfamily protein
4.89898 Ahg951082 BAH domain ;TFIIS helical bundle-like domain
8.7178 Ahg474290 Amino acid dehydrogenase family protein
8.94427 Ahg483289 RING/U-box superfamily protein
11.7473 Ahg949816 dentin sialophosphoprotein-related
13.5647 Ahg477668 apyrase 1
15.0997 Ahg484697 RING/U-box superfamily protein
16.7332 Ahg477535 RING/FYVE/PHD zinc finger superfamily protein
16.8819 Ahg479481 magnesium transporter 4
16.9706 Ahg494209 nudix hydrolase homolog 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression