Detail



ID : Ahg473569

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473569|fgenesh2_kg.1__3523__AT1G34150.1
Sequence
CCGTCGTTGA ACTCTTTTCA ACCGGCGTCG ATTCTCGTTT CGTCGCCGAC CGGCGTCGAT TCTCGTTTCG TCGCCGTCAT TCGTGTATCC GTCTTAAACT CCGCCGCTGA TTCATGACTA TCTCCGACGG AAAATCCGAC CCCAGCGGCG ATGACCGAGA CTCTGAAATC GCTAAAGAAA CCGAATTAGT GTTTCTCCGT AATCGCGTGA AGGAGTTAGA AGCGGAAAAT GCTAAGTTGT TGTCTCAGGT TTCAAGCTGC CAATACCAAC AGATGGAAGT GAAGCATGAT CGGTCAGTGT CAGATTCTAG TAGCTTAGTT AGGAGAAGGA GAGTTAGGAA AGGAGATAAG AATAGTATAC CGAGTCATCT TATCTCGAAG AGATATGTTG CACTAAAAAT CATGTATTTT GGTAAGAGAT TTTACGGTTT TTCGGCTGAA GCACAAATGG AACCAAGTAT TGAGTCAGAA GTTTTTAAAG CACTTGAAAG GACACGGCTT TTAGTTGGGG ACAAGAAAGA TTCTTGTTAC TCGAGATGTG GAAGAACAGA TAAAGGTGTT TCGTCCACAG GGCAGGTGAT TGCTTTGTTC TTAAGATCCA GACTGAAGTC ACCTCCTGGA GACTCTAAAG CCCAAGTTAA TGGGAAAACG GGTGAAAGAC CAGAATATGA TTATGTAAGA GTTCTAAATC GTGCTCTCCC TGATGACATC CGAGTTATTG GATGGTCTCC TGCTCCTGTT GACTTTCATG CAAGGTTTAG TTGCTATGCT AGAGAATACA AATACTTTTT CTGGAGACAG AACCTGAATC TTTCGGCCAT GGACATTGCC GGGAAGAAGT TCATTGGGGA GCATGATTTC AGGAACTTCT GCAAGATGGA CGTGGCAAAT GTCCATTGCT ATACACGACG TGTTACTTTC TTTGAAGTCT CTCCTTGTCA AAATAGTCAC GAGGGTGATC AGCTTTGCAC ATTTACAATG AGAGGCAGTG CTTTCCTGTG GCACCAGATC CGCTGCATGG TCGCCGTGCT ATTCATGATT GGGCAGGGCG TTGAATCAGT TGATGTGATA GATACATTGT TGGACACGAA GAAAACGCCA AGAAAACCTC AATACCTCTT GGCCTCAGAG ATACCCTTAG TCCTCCGTAC ATGTGAATTC GAAAATGTTG ACTTCATATG TTCTCCAGGC GCTGCAGAGT CACTTCGGTC TCATTTCAAG AATGAATCGT TGACATACCA ATTAGAGTCT GTGATTTATC AGGAGGCTCT CCGGAACTGT TTACCTCTAA GCAATGTTTC AACAGAGGAA AGCTCATGCA ATGGCGTAGA GAAAAAGAAG AAAAGAGCAG AACACGTTCC CCTATTATCT CGACCAACTG AGCCGTCGTA CGAAGAACGA GCTGCGAAAC TGAAACCAAG GAAACAAGAA ACTTGTCATG TGTAGTGTAA GGGGGCATCT CGGCGCGGCG ACCATCAAAA GAATAGAGAG GCTTTGAGTC TGTTGTTCGT AGCAGTTGAT TGTTTGAATT GATTACGTAT ACAGTAATAA TTACTAATGT ATGGTTTAAA TATTTTTCTA AGAAATTAAA TTTTCGTTAG AGCTCGTGTC TCTAACTTAT ATTATATAAA ACAAAGTGTT GTAGGATAAT TATAAAAACA ACTAAAATTT TAT 
Length1673
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15156991.. 15160540
Download Sequence
A.thaliana
AGI-codeAT1G34150.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg485927 LisH/CRA/RING-U-box domains-containing protein
5.09902 Ahg909351 Zinc finger C-x8-C-x5-C-x3-H type family protein
6.7082 Ahg484697 RING/U-box superfamily protein
10.198 Ahg888090 Basic-leucine zipper (bZIP) transcription factor family protein
12.4097 Ahg476825
16.4317 Ahg900811 GCN5L1 family protein
17.2337 Ahg946852 HISTIDINE BIOSYNTHESIS 5B
19.1833 Ahg488168 Transducin/WD40 repeat-like superfamily protein
23.6643 Ahg484289 18S pre-ribosomal assembly protein gar2-related
29.1548 Ahg471988 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression