Detail



ID : Ahg484733

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484733|fgenesh2_kg.5__725__AT3G29810.1
Sequence
CACATCTTCG AGAAGTTTCC GCCGGCGGGA GAGATCAAAG ACAACTGTTG ATCAGAAATC AGATATCAGA GATATGAACA TTCTCTTCTC TAGATTCTCC ATTTTGCTTC TGTTTCTCTG TTCTTGGACC AGTTTCACCA CAACAGAGGC TTATGATGCA CTTGATCCAA CTGGAAACAT TACTATAAAA TGGGATATTA TAAGCTGGAC TCCTGATGGT TATTTGGCTG TTGTAACAAT CTTTAATTTC CAACAATACC GTCATATTGA GGCGCCCGGG TGGCAATTAG GATGGAGTTG GTTGAAGAAG GAAGTGATAT GGAGTATGGT TGGTGGGCAA GCAACAGAAC AAGGAGATTG TTCTAAGTTT AAGGGTAACA TTCCTCATTG CTGCAAGAAA ACCCCGGCCA TCGTTGATTT GTTACCGGGA ACTCCTTATA ACCAACAGAT ATCCAACTGT TGTAGAGGCG GTGTGATTAG CGCGTGGGCA CAAGACCCTG CAACTGCGAT TTCTTCGTTT CAGATTAGTG TTGGTCAATC TGGAACAACT AATACTACGG TTAGAGCACC TAGGAACATC ACTTTGAAGG CGCCAGGACC TGGTTACACT TGCGGGCCTG CAAAACTCGT TAAGCCTAGT AAATTCATTT CTGCAGATGA ACGAAGAAAG ACTCAGTCCT TGCTGACATG GAACATTACG TGCACGTATT CGCAGTTTCT AGCACGGAAA ACTCCGACTT GTTGTGTCTC ACTCTCATCC TTCTACAATG AAACTATAAT ACCATGCCCA ACTTGTTCTT GTGGATGTCA AAATAGTTCT CAAGCTGGTA CATGTGTTGA CCCGAAAATA GCTTCGGTTG TACCAGCTTC GGGGAAGAAC AACCTTGAAC CGCTCTTGCA ATGTACGCAA CATATGTGTC CCATCCGAGT TCATTGGCAT GTAAAAACTA ACTACAAAGA GTACTGGAGA GTGAAGGTCG CAATCACAAA CTTTAACTAC AATATGAACT ACTCGCAGTG GAACTTAGTC GTTCAGCATC CCAACTTCGA CAATCTCACT CAGCTTTTCA GCTTTAACTA CAAACCGCTT AATCCTTACG CAAACATAAA TGATACGGCC ATGCTATGGG GAATCAAGTT CTACAATGAT TTTTTGAGCC AAGCTGGTCC AGTAGGCAAT GTACAATCAG AGCTTCTCTT CCAAAAGAAC CCGTCGGAGT TCACATTCGA GAAAGGATGG GCGTTTCCGA GGCGCATTTA CTTCAACGGT GATAACTGCG TTATGCCACC TCCAGACTCT TATCCATGGC TTCCGAACGC TACTCCAAAC CATGCAGCCT CGCCATTTGT TATACTTCTC ATCACTTTCT TTTTTGTTTT AATTCTTATG TAAAGGGATG TTTGGTGATG TTTACATTAC AAGTCAGTGT GTTATTAGGA AATAATT 
Length1447
Protein Sequence
Protein Residue
Map Locationscaffold_5: 6350699.. 6352965
Download Sequence
A.thaliana
AGI-codeAT3G29810.1
DescriptionCOBRA-like protein 2 precursor
TAIR curator summary
Alias[COBL2][COBRA-like protein 2 precursor]
Gene coexpression
MR
MR Locus Description
25.318 Ahg475116 WRKY family transcription factor
27.6767 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
37.1483 Ahg490909 conserved peptide upstream open reading frame 49
39.1918 Ahg492857 VACUOLAR SORTING RECEPTOR 7
48.8672 Ahg489376 SPFH/Band 7/PHB domain-containing membrane-associated protein family
51.7204 Ahg494088 Thioredoxin superfamily protein
63.6239 Ahg493150
65.5286 Ahg490867 Peroxidase superfamily protein
71.8262 Ahg492497 cation/H+ exchanger 17
72.1665 Ahg934312 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression