Detail


ID : Ahg484842

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484842|fgenesh2_kg.5__834__AT3G44260.1
Sequence
ATGGCGATCA TCAAATCAAA CACATATAAC AAACCATGTG GCGGTATCAC CGTCGTGACT CGTGAAGTGT GGGCGGAGAA TCTCGAATCA GAATTTGAGT TAATCAGCGA AATCATCGAC GATTATCCAT TTATCTCAAT GGACACTGAA TTTCCCGGCG TGATTTTCAA ATCCGATCTC CGATTTACAA ATCCCGCCGA TCTCTATAGT CTTCTTAAAG CTAACGTCGA CGCGCTTAGT TTAATCCAAG TCGGTCTCAC TCTCTCTGAT GCTAACGGTA ACCTCCCAGA TCTCGGTGAA AATCACCGAG GATTCATCTG GGAGTTCAAT TTCCGAGACT TTGATGTGGC GCGTGACGCA CACGCGCCTG ATTCGATCGA GTTACTTCGT CGGCAAGGTA TCGATTTCGA GCGGAATTGT CGCGACGGTG TTGATTCGGA GAGGTTTGCG GAGTTGATGA TGTCGTCGGG GCTTGTTTGT AATGAGGATG TGAGCTGGGT GACGTTTCAT AGCGCGTACG ATTTCGGTTA CTTGATGAAG ATTCTCACGC GCCGTGAATT GCCCGGCGCG TTGGGTGAGT TTAAGCGCGT GATGAGAGTG TTGTTTGGTG AGCGCGTGTA TGATGTGAAG CATATGATGA AGTTTTGTGA GAGGAGATTG TTTGGTGGTT TAGACCGGGT TGCTAGGACG CTTGAGGTTA ACCGGGCGGT TGGGAAATGT CATCAAGCCG GTTCGGATAG TTTGCTTACG TGGCATGCGT TTCAGAGGAT GAGAGATTTG TATTTTGTTC AAGATGGGCC GGAGAAACAT GCTGGGGTTT TGTATGGGCT TGAGGTTTTT TAAGCGGTTT ACTTTTTTTT TTTTATAATT CAAATTCAAT TAATTAACTC A
Length891
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10272734.. 10273624
Download Sequence
A.thaliana
AGI-codeAT3G44260.1
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
TAIR curator summary
Alias[AtCAF1a][CAF1a][CCR4- associated factor 1a]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg908965 nudix hydrolase homolog 21
2 Ahg945643 dicarboxylate carrier 2
3.4641 Ahg488600
6.48074 Ahg312784 nudix hydrolase homolog 4
6.48074 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
6.7082 Ahg483040 ortholog of sugar beet HS1 PRO-1 2
6.7082 Ahg472978 salt tolerance zinc finger
8.94427 Ahg481911 Protein phosphatase 2C family protein
9 Ahg476579 Protein of unknown function (DUF793)
9.16515 Ahg476631 Integrase-type DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression