Detail



ID : Ahg484882

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484882|fgenesh2_kg.5__874__AT3G44820.1
Sequence
ATGTCACCTG TTGCTAAAGT CTCTGAGTTT CACAGAGAAG GGAACGATTG GTACATACCT CTCTCTTTCC CTTCTCTCTC TCTGTTTTTG CATGTATCTT TATTCAATTC TTCACTTGCC ATATCAGTTT ATAGATTCTC CTTAAGCACA ATTTGGTTTT GCAAAACAGG ACTGTCAAGT GATATCACTG TTGTTGTTGA TGATGTGAAG TTCCATCTTC ATAAGTTTCC ATTGGTTTCT AAATGTGGAA AGCTAGCACG GATGTATGAA GATTCTAAAA GCACTGATAA GCAATCTCTC TGGACAACAG TGCTTGAAGA GTTCCCTGGT GGCGCAGACA ATTTCTTGAT AGTTGCGAGA TTCTGTTACG GGACTCGAGT AGATATCACC TCGAAAAACT TAGTTTCCAT ACACTGTGCA GCTGAGTACC TTGAAATGAC AAATGAATAT GGGGAAGATA ACTTAATTTC CCAAGTTGAA ACATTTTTGC ACAAGCATGT GCTTCGCAAT TGGAAAGACT GTATCTTGGC GTTACAAAGT TCTAACCCGG TGTTGAAGAG TGCAGAAAAG CTTCAGATGA TACCCAAACT CATGAACGCT GTGTCCACGA TGGTGTGTAC TGACCCAAGT TTGTTTGGAT GGCCCATGAT GATGTATGGT ACATTGCAGA GTCCGGGTGG AAGCATTTTA TGGAATGGAA TAAACACGGG GGCGCGAATG AGAAGCTCGG GTTCGGATTG GTGGTATGAA GATATCTCTT ATCTTAGTGT AGATTTGTTT AAAAGGCTCA TCAAGACGAT GGAAACGAAA GGTATACGTG CTGAAAGTTT AGCCGGTGCG ATGATGTATT ATGCGAGAAA GTACTTGCCG GGTTTGGGAC GGTGGCAGAG CGGAACAAGT GACAGCAGCA AAAGAATGCA GTTGGAGCTC GCAACGCTCG AGAATCTTCT GATTCTGAAC TATTCTGATT CAGAGACGTT GTACAATGTA GATTGTGTAG AACGAATAGT CCGTCATTTT CTGATCGATA GCTACATGGC TGAGGTTGCT TCCGATGTGA ATCTAAAACC GGATACGATG CGGTCTCTTG CAGCAGCTCT TCCAGAGTCT TCAAGACCCT TGTATGATGG TCTATACAGA GCATTTGATA TCTATTTCAA GGAGCATCCA TGGCTATCAG ATAAAGACAA GGAACAACTC TGCAACATCA TGGACTATCA AAGACTCTCT ATAGACGCTT GCGCTCATGC TTCCCATAAC GATAGGTTAC CACTCAGAGT TGTTCTTCAA GTCCTCTTCT TTGAACAAAT GCATCTCAGA ACCGCTCTTG CAGGCGGTCT CAATGTTGCA AACACCGAAA CAGCTCATGC ACTGACGATC CCTGGTCGAA GAACTGGACA GGAGATAGTT CAGCGAGATG GTTGGGTGAC TGTTGTGCGC CAAAACCAGG TTTTAAAAGT TGATATGCAG AAAATGAGGT CACGGGTTGG AGAATTAGAA GAGGAGTTTC AGAGTATCAA GCAGGAGATG AAGAAGAGAG TGAGCAAGTC CTCTAGCTCA ATGGGCTCGC CTCGTCTGGT CAAGCTCGGC TGTAAGTTTC TTCTTCCACG AGCCTCTGAT GCCAAGAATG ATACAGTCCA GAACTCAGTG TCCAGCACTC CTAGATCTGC TGCCGCTGAC CACGCACTCC CTCGTTCCTC CCGCCATTCC AAACACCGCA AAAGCTTCTC CTTTTTCGGA TAA 
Length1743
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10938139.. 10940733
Download Sequence
A.thaliana
AGI-codeAT3G44820.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.06226 Ahg926773 Transmembrane Fragile-X-F-associated protein
21.3073 Ahg347545
36.4966 Ahg944727 Regulator of Vps4 activity in the MVB pathway protein
38.9743 Ahg482870 RNA-binding KH domain-containing protein
44.4522 Ahg493254 LSD1-like 3
50.3984 Ahg480549 multimeric translocon complex in the outer envelope membrane 132
59.5147 Ahg482437 myosin heavy chain-related
66.2873 Ahg491361 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases
66.3626 Ahg484020 DEA(D/H)-box RNA helicase family protein
70.852 Ahg951139 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression