| Annotation |
|---|
| Description | jgi|Araly1|491361|fgenesh2_kg.7__794__AT4G33240.2 |
| Sequence |
TCTTGAATCG AGCATAAATT CTGGATTTTT GAAGTTTGAG AGTGATCCAG TGACTTGGTC TCAATCTCGG AGGTATCTTA TTCCAGGGAT CAAGGATTAG ACTTAATGCG ATTTAGCAAA TGGGTTTTTC ATGAAGACTC TCCTTGTTGT TGGGGAGATT CAATAAATGG ACTCACCAGA TCACAAAGCA CCTGGCTTTG TTGACATAGT CAAATCTTGG ATCCCTAGAA AGAGTGAGTC CTCAAATATG TCGAGGGATT TTTGGATGCC TGACCAGAGT TGTCCTGTGT GTTACGAGTG TGATGCTCAG TTCACTGTGT TTAATCGAAG ACATCATTGC CGGCTTTGTG GTCGAGTGTT TTGTGCCAAA TGCGCTGCAA ATTCTATCCC ATCTCCATCA GATGAAACAA AGGATAGTCA TGAGGAGCCA GAAAGGATTA GGGTTTGTAA TTACTGCTAC AAACAGTGGG AACAGGGGAT AGTTCCCCCT GATAATGGGG CTTCTATTAT TAGCCTTCAT TTTAGTTCAT CCCCTTCTGC TAGAAGCGTG GCAAGTACTA CCTCTAATAG TAGCAATTGC ACCATTGATT CAACTGCTGG ACCTTCCCCT AGACCCAAAA TGAATCCCCG AGCTAGCCGT CGCGTCTCGT TAAACATAGA TTCTGAAAAG TCTGAGAAGC AGAATGCAAC ATCGCGTAGG AGCCTGGATC CTTATGGGCA TGTGCTAGAT TCTGAAAATC AAGTTGAATT CTTTGTGAAC AGTGGCAGGA GTGATGGTGA AGCTGATGAT GATGACGATT ATCACTCTGA TTTTGCACAA TCTTACGCTC AAGGAAATGA CTACTATGGT GCCATCAGCC TCGATGAAGT AGACCAGATC TATGGGTCAC ATGAAGCTCA TGACGTTGGT GTAAAAATAG AACCAAACAT AAGTTGCTTT CCCCCTGATC AAGATCTTGA CTCACTGAAT ACAGATACGA TAGATAAAAC CAGACAACAA GAAAATGGAT GGAACGATGT GAAGGAGGGA AGCCCTCCTT GTGAAGAGTC TTTTGAGCCC GAAGTAGTGG ATTTTGAGAG CGATGGCCTG TTATGGCTAC CGCCAGAGCC AGAGAACGAA GAAGATGAAA GAGAAGCAGT GCTATCTGAT GATGACGGTG ATGAAGGTGA TAGAGGTGAC TGGGGCTACC TTCGCCCATC AAATAGCTTT AATGATAAGG ACTTCCACTC TAAGGATAAG TCCAGTGGTG CTATGAAAAA TGTTGTTGAA GGGCACTTTA GGGCTTTGGT AGCCCAACTT TTGGAGGTTG ATAATCTACC CATGGTCAAT GAAGGGGATA AAGAGGGCTG GCTTGATATA ATTACATCAT TATCTTGGGA GGCTGCAACG CTTCTCAAGC CAGATACAAG TAAAAGTGGA GGAATGGATC CAGGAGGATA CGTGAAGGTT AAATGCATCC CTTGTGGACG TCGCAGTGAA AGTATGGTCG TGAAAGGAGT TGTTTGTAAA AAAAATGTGG CCCATCGGCG AATGACTTCA AAGATTGAGA AGCCACGTCT GCTAATCCTT GGAGGAGCTC TGGAGTATCA GCGCATCTCT AACCAGCTGT CTAGTTTTGA CACTTTGTTG CAACAGGAAA TGGACCATTT GAAGATGGCT GTTGCCAAAA TTGATTCTCA CAATCCTGAC ATTCTCTTGG TGGAGAAATC TGTATCGCGA TTTGCGCAGG AATATCTTCT TGCGAAGGAC ATATCTCTTG TGTTAAATAT TAAAAGGTCC CTTCTAGAGC GCATATCTCG CTGTACTGGT GCGCAGATTG TCCCTTCGAT CGACCAGCTC ACATCACCAA AGCTGGGTTA TTGTGACCTG TTCCATGTGG AAAAGTTTGT CGAGAAACAT GTTAGTCCTT GTCAAGTTGC GAAGAAAATG GCCAAGACTT TAATGTTTTT TGATGGCTGC CCGAAACCTT TGGGTTGTAC AATATTGCTT AAGGGGGCGC ATGAAGATGA GCTAAAGAAG GTGAAACATG TGATTCAGTA TGGAGTTTTT GCAGCATATC ACTTGGCTCT TGAGACATCC TTCCTAGCAG ATGAAGGTGC TTCCCTTCCA GAACTTCCTC TGCAGACCCC AATTACAGTG GCTTTACCTG ATAAACCATC AACGATTAAC AGATCAATAT CGACAATACC TGGTTTTACT GTGTCAAGTG CTGAAAAGTC TCCAACTACT GAGTTAAGGG GTGAGCCACA TAAAGCCAAT GGCGACCTTA CCGGTAATTT CACTTCTAGT AAGACTCATT TGCAAGGGAA ATTGGATGGA AACGACAGGA TTGACCCATC TGAAAGACTG CTTCACAACT TGGATACTGT TTACTGTAAG CCTCCAGAAA TTATTACCAC TAAGGTCGAT GGGTTAGTTC CTACTCTAGA ACCCAGGCAG CTATCGTTTC ACGTGGAAGA ACCTTCTGTT CAAAAAGATC AGTGGTCTGT TTTACCCGGT GCCACAGAAA AAGTAACCGA GGGTGCTTAC ACGAATGACT CCGCAGTAAT AGGAAATCAA AATTGTAGTA GACAGGAACA GATAGACTCT TCAAAAGGAG ACTTTCTTCC ATCAGCTTCT GACCATCAAA GTATATTGGT TTCCTTATCA ACAAGATGTG TATGGAAAGG ATCTGTGTGT GAGCGGGCTC ATCTACTCCG TATCAAATAC TATGGGAGCT TTGACAAGCC TTTAGGACGG TTCTTAAGGG ATAATCTCTT TGATCAGGAT CAGTACTGCC CGTCATGTAC GATGCCAGCG GAAGCACACA TTCATTGTTA TACTCATAGG CAAGGTAGCC TGACAATATC TGTTAAGAAA CTGCCTGAAT TGCTACCTGG GCAACGTGAA GGGAAGATTT GGATGTGGCA TCGGTGCCTG AAATGTCCTC GGATCAATGG CTTTCCTCCA GCCACACGCA GAATTGTAAT GTCAGATGCT GCGTGGGGCC TGTCTTTTGG CAAATTTTTG GAACTGAGCT TTTCTAACCA TGCAGCGGCT AGTCGTGTGG CCAACTGTGG TCATTCCCTT CACAGAGACT GTCTCCGGTT CTATGGTTTT GGGAGAATGG TGGCTTGCTT CCGCTATGCT TCAATCAATA TTTTCGCAGT GTTTCTGCCA CCAGCAAAAC TTGAGTTTAA CTATGAGAAC CAGGAATGGC TCCAAAAGGA ATCAAAAGAG GTGATTAAAA AAGCGGAAGT CCTTTTTAAT GAGGTTCAGG AGGCTCTTAG TCAAATTTCA CTGAAAACAA TGGGTACAGG TTCCAAGGGC AGCACTCTCA ACAAGATAAA GCTTTCTCTT GAAGAACTTG CAGGACTTCT TGAGCAACGT AAAAAGGAAT ATAAGGAATC ATTGCAGCAA ATGTTAAATG TGGTTAAGGA TGGACAACCT ACTATTGATA TCCTTCTGAT AAATAAACTT CGAAGGCTGA TACTTTTCGA TTCATATGCT TGGGATGAAT GCCTAGCAAG GGCGGCCAGT ATGGTAAGAA ATAACTATTC TGAAGCTCCG AAGAATTCTG CCTCAAAATT TATGGGTCGT AACGTCTCCT TAGAGAAGCT CAGTGATGAA AAAATAAAGT CGATACCGTC CCATGTTGCC AGTAGTAATG ACTCTCTTCT CCAGGATGCA GAGTACGAAA CATGTCCTAA CCAAGGTAAA TCATTTGCTG ATACTAGTGG CAAATTTGCT ATTCCTGAAG ATGTAGGCCC AGACATACCC CCAGAATGTA GGATGGAGTT CGACCCTAGT GAAGGTGGTA AAGATAACTT TGTGGAGTCT TCACAGGTGG TTAAAGCAGT ACACTCCGAG AGCCAGTATC AAGCAACAGA CTTATCTGAT ACTCTTGATG CAGCATGGAT AGGTGAACAA ACTACTTCAG AGAATGGTCT TTCCCGTCCG CCTAACAGAG CTGCTTCAAC AAATGGAACT CAGATCCCTG ATTTAAGGCT GTTGGGTTCA GAAAGTGAGC TGAACTTTAA AGGAGGCCCT ACCAATGATG AACATACAAC ACAAGTTCAG TTGCCTTCTC CTAGTTTCTA CTATTCACTC AACAAGAATT ATTCGCTTAA TTCTCGCAAG CATATTATGG CTGAAGACCG GCCGGTTTAT GTTTCTTCAT ATAGAGAGCT TGAATGGCGA AGTGGTGCGA GGTTGCTGCT TCCTCTGGGA TGTAATGACT TAGTACTGCC AGTTTATGAT GACGAACCTA CTAGTATCAT AGCTTATGCC CTTACGTCAT CAGAATATAA AGCTCAGATG TCTGGATCAG ATAAGTCAAG AGATCGCTTG GATAGTGGAG GTTCCTTTTC ACTTTTTGAT TCTGTTAATC TTCTCTCATT GAACTCTTTG AGTGATTTGT CGGTCGACAT GAGTAGAAGT CTTAGCTCTG CTGATGAACA AGTCTCGCAG CTGCTACATT CATCACTGTA TTTGAAAGAT CTGCATGCGA GGGTTTCGTT TACAGATGAA GGTCCTCCTG GGAAAGTGAA GTACTCTGTG ACGTGTTATT ATGCTAAGGA GTTTGAAGCC CTGAGGATGA TTTGCTGTCC TTCAGAAACA GATTTCATTA GATCTCTTGG TCGTTGTAGA AAATGGGGAG CCCAGGGTGG AAAGAGCAAC GTCTTCTTTG CAAAAAGTTT GGATGACCGT TTTATAATCA AGCAAGTTAC AAAGACAGAG CTTGAGTCCT TCATCAAATT TGGGCCAGCT TACTTCAAAT ACCTGACTGA GTCCATCAGT ACTAAAAGCC CTACAAGCCT TGCAAAGATC TTGGGAATCT ATCAGGTTTC ATCCAAACAC CTTAAAGGAG GAAAAGAGTT CAAAATGGAC GTCTTGGTGA TGGAAAATCT TCTGTTCAAG CGGAACTTCA CTAGGCTTTA TGACCTAAAA GGCTCCACTC GTGCTCGTTA CAATCCCGAT ACAAGTGGTA GCAATACAGT TTTGCTGGAC CAGAATCTGG TCGAAGCAAT GCCGACATCT CCAATATTTG TTGGGAGCAA GGCAAAACGT CTTCTTGAAA GAGCAGTCTG GAATGATACA TCCTTTCTTG CTTCGATTCA CGTAATGGAT TACTCCTTAC TAGTCGGGGT AGATGAGGAA AGAAACGAGC TGGTTTTAGG AATTATCGAT TTCATGAGGC AATACACTTG GGACAAACAT TTGGAGACTT GGGTCAAGAC TTCAGGGCTC CTTGGAGGAC CCAAGAACTC AACTCCAACA GTAATATCGC CTCAGCAATA CAAGAAAAGA TTCAGGAAAG CGATGACGGC TTATTTTGTG ATGGTTCCTG ACCAATGGTC GCCTGCCACG GTTGTGCCAA GCAACAGTTC TGCAGCAGAG GTGAAGGAGG AAGAAGAGAG AGACAATCCT CAAGCTGTTG GTAACAAGTC CTGAAGCATT TTCTGCAAGA GACATACACG ATATTCAGTT AGCAGATATA GTTTTTATTC TTTTTGGTTG GAATGGTCTT TTGGGTAATT TGTGTTTATG TATTACCCTT GGCCTTAGGT GTGGCCTATG CCTCTTCCAT CGCCTTTGCA TCAGAATTAA TGAAAGCAAG ATGCAATTGT ACATACACTG CTTCTATCTT TTAGTGTTTG TTATTCGTTA CTTATGTTTT TATCAACA |
| Length | 5668 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 3122744.. 3131143 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G33240.1 |
| Description | 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases |
| TAIR curator summary | Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. |
| Alias | [FAB1A][FORMS APLOID AND BINUCLEATE CELLS 1A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg935792 | receptor-like kinase in in flowers 3 |
| 4 |
Ahg924606 | Protein kinase protein with tetratricopeptide repeat domain |
| 4.58258 |
Ahg944727 | Regulator of Vps4 activity in the MVB pathway protein |
| 11.225 |
Ahg333455 | nitroreductase family protein |
| 13.7113 |
Ahg329195 | modifier of snc1 |
| 16.0624 |
Ahg331828 | |
| 26.8328 |
Ahg331106 | RING/U-box superfamily protein |
| 28.5657 |
Ahg478868 | nine-cis-epoxycarotenoid dioxygenase 3 |
| 29.2916 |
Ahg493637 | phytochrome C |
| 32.5576 |
Ahg935148 | RNI-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|