| Annotation |
|---|
| Description | jgi|Araly1|485134|fgenesh2_kg.5__1126__AT3G47700.1 |
| Sequence |
ACGACGAATC GCAAATGGAG GCGATCAAAC CACTTCCACA GGTCTCGAGC TTCTCCGCTT CAGTATTTAG CTTCCTCGAT GACAAATTCA GAGACTCCAC GGATCTCTCC CAGTCTCCAG GTCTGGTTTC TGAGTTACAG ACCGAGATTT CCGAATTGGA TCAGAGATTA GCCGGATTAA ATCGCCAGCT CGAGTCCGGT CTTGCTTCTT ACGCTTCGTT TTCCGATCGC GTCGGTGGTT TATTTGTCGA GGTTAATGCC AAATTGGCTA ATCTCTCTTC TTCTACCTCC GTTCCTCGCT CCGCGTCAGA TGGCGGAAAG GAGGAGGAGG CGACGGAGCA TGTAGCTGGG GAGGAGCTTC CGTCATTAGC AAAGGAAGTA GCACAAGTTG AGTCTGTGCG GGCTTATGCT GAGACTGCAC TAAAACTTGA TACTCTAGTG GGTGAGATCG AGGATGCTGT GATGTCTTCT TTGAATAAAA ACTTGAGAAC ATCTCGGTCA AGCGGTTTTG AAGAAGTGCG TCTACATGCT ATCAAAACAC TTAAAACGAC AGAAGAGATA CTGATTTCAG TAGCTAGGAG ACATCCTCGG TGGGCACGTC TTGTTTCTGC AGTTGATCAC AGAGTAGATA GAGCCTTAGC CATGATGAGA CCTCAAGCAA TTGCGGATTA CAGAGCGTTG CTTTCTTCTC TTGGATGGCC ACCTCAGCTT TCTACACTAA CTTCAGCGAG TCTTGATTCA AAGTCAGAAA ATGTCCAAAA TCCGCTTTTC ACCATGGAAG GGAGCCTCAA AAGTCAATAC TGTGGAAATT TTCAGGCCTT GTGCAGCCTG CAGGGGTTGC AGTTGCAAAG AAAGTCGCGG CAGCTTGGGA GCCATAAGGG AGAAAATGTT CTTTTCCACC AGCCACTCTG GGCTGTTGAA GAGCTGGTCA ACCCTCTGAC AGTTGCATCT CAGCGACATT TTACAAAGTG GAGTGAAAAG CCTGAATTCA TTTTTGCCCT TGTTTATAAA ATCACAAGGG ACTATGTCGA TTCTATGGAT GAGTTGTTAC AACCGCTCGT TGATGAAGCA AAACTAGCTG GCTCATTGTC TTTGTACTTG GTGAAAGAGA TATTCCCTAT ATATGTTGGA CAGCTAAACG AAGCAAATGA AACTGATCTT CGTTCTGAGG CCAAGGTTTC GTGGCTCCAT CTCATTGACC TGATGATCTC TTTTGATAAG CGAGTACAGT CTCTGGTATC ACAATCAGGA ATACTTTCGC TTCAAGAAGA TGGGAATCTT CTGAGAATTT CCTCTCTCTC AGTTTTCTGT GACAGACCTG ATTGGCTTGA TTTATGGGCA GAGATAGAGC TAGATGAGAG GCTAGTCAAA TTCAAGGCAG AAATTGATAA CGACAGAAAT TGGACAGCAA AGGTCCAAGA CGAACTCATC TCCACTTCCA ACGTTTACAG ACCACCAATC ATTTCCAGCA TCTTTCTACA GCACTTGTCA TCAATAATCG AACGATCCAA ATCAGTGCCG GCCATTTACT TGAGGGCAAG GTTCCTGAAA TTGGCAGCCT CACCAACAAT CCATAAGTTC TTGGATTGTC TCCTTGTCAG GTGCCAAGAT GCCGAAGGAC TAACTGCATT AACCGAAAAT AACGATCTAA TCAAGGTCTC AAACTCTATC AATGCTGGTC ACTACATTGA ATCTGTATTA GAAGAATGGT CTGAAGATGT ATTTTTCCTC GAAATGGGAA CTGGACAGCA TGATCCACAG GAAGTTCCAG GACTGGAGAA CTTTACGGAA CCTTCTGAAG GTATTTTCGG AGAAGAATTT GAGAAGTTGG AGAAGTTCCG GCTAGAGTGG ATAAACAAGT TGTCTGTGGT GGTCTTGAGA GGCTTTGATG CTCGAACTCG AGAATACATA AAAAACAGAA AGCAATGGCA GGAGAAGAGA GACAAAGAAT GGACGGTGTC AAGGGCACTA GTTGGGGCTC TAGACTACTT GCAAGGAAAA GCGTCTATAA TAGAAGAAAA TCTAAACAAA ACAGACTTTA CAGCTATGTG GAGGACTCTA GCCTCTGAAA TAGACAAGTT ATTCTTCAAC AGCATCTTGA TGGCAAACGT GAAGTTTTCC AATGATGGAG TCGAAAGGTT AAAAGAAGAC ATGGAGGTTC TCTATGGGGT TTTCAGGACA TGGTGCGTTA GACCCGAAGG TTTCTTTCCT AAACTAAGTG AGGGGCTTAC GCTTCTGAAG ATGGAAGAGA AGCAAGTGAA GGATGGTCTG AGTAGAGGCG ATAAGTGGTT ACGTGAGAAC AGAGTTCGAT ATTTGAGTGA AGCCGAAGCC AAGAAGGTAG CTAAAAGTAG AGTGTTCTCT TAGTTAGATC GCTTTCAGCA AATCAATATC TCAGACTAGG AAGGTACATT CATAGGTGGG ATCATTTCAT TTATTTGTGG ATTAAAATAT AACACTCAAG TTTGGATTTT TAATTGAAGT TGTACTAACC AGCCCTGGTT TTGTTTCGTC TCGGTGTGAA ATTAATGATT CATGATTTAA TAG |
| Length | 2543 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12750005.. 12753067 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G47700.1 |
| Description | RINT-1 / TIP-1 family |
| TAIR curator summary | Involved in transportation of seed storage proteins from the ER to the vacuole. Mutant seed cell accumulates the precursors of 12S globulin and 2S albumin instead of the vacuolar-located mature proteins. |
| Alias | [MAG2][maigo2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.6635 |
Ahg915639 | topoisomerase II |
| 22.7156 |
Ahg951726 | tRNAHis guanylyltransferase |
| 25.0998 |
Ahg926121 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| 31.5278 |
Ahg899070 | Ubiquitin related modifier 1 |
| 32.7109 |
Ahg481838 | pumilio 1 |
| 34.7851 |
Ahg488460 | alpha/beta-Hydrolases superfamily protein |
| 41.2432 |
Ahg940448 | nuclear matrix protein-related |
| 44.3621 |
Ahg473774 | ubiquitin interaction motif-containing protein |
| 47.655 |
Ahg313324 | Mediator complex, subunit Med10 |
| 48.7032 |
Ahg483691 | WD-40 repeat family protein / beige-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|