| Annotation |
|---|
| Description | jgi|Araly1|485172|fgenesh2_kg.5__1164__AT3G48110.1 |
| Sequence |
GGATAACACA AAACCTCTCT CTCTCTCGTC TTCCAAAATC CACCACTACA CATTGACTCT CTTCTACAAA GAGTCTGGTC ACTCATGGCC ATCCTCCATC TTTCTCTTCC TCTTATCGTC TCTTTCCTTC GTCCTCACGC CTCTCCTCGC TTCTTCCTCC TCCCTCACTC TCTTTCTCAT TCCCCTTTTC TCTCCCGCCG CCGTTTTCAC CGTACCTCCG CCGTTTCCTC CGCCGCTGTT CATCCCCAAT CCTATCGTAA GCCCGACGAT GATGTCACCC GCGCCGCGTC TGTTCCTACA TTCCAACAAG CGATTCAACG CCTCCAGGAA TATTGGGCTT CCGTCGGATG TTCTGTTATG CAACCAAGTA ACACTGAGGT CGGAGCTGGC ACCATGAATC CTTGTACCTT TTTGAGGGTT CTTGGTCCTG AACCATGGAA TGTTGCTTAT GTTGAGCCAA GTATACGTCC TGATGACTCT CGCTATGGAG AGAACCCAAA TAGGCTTCAA AGACATACTC AATTTCAGGT CATATTGAAA CCTGACCCTG GAAACTCTCA ACAGCTCTTT ATCAACAGTC TTTCTGCTTT AGGTATTGAT GTGACTGCAC ACGATATACG GTTTGTAGAA GACAACTGGG AGAGCCCGGT GCTTGGTGCT TGGGGGTTGG GCTGGGAGAT TTGGATGGAT GGTATGGAAA TCACACAATT TACTTACTTC CAGCAGGCTG GAAGTCTTCC GTTGTCTCCA GTATCTGTTG AAATCACTTA TGGGCTTGAG CGCATCATCA TGTTGCTTCA GGAAGTTGAC CATTTCAAAA AGATCGTATA TGCTGATGGA ATCACCTACG GGGAGCTTTT CTTGGAAAAT GAGAAGGAAA TGAGCTCATA TTATTTAGAG CATGCTAGCG TGGACCGCCT TCAAAAGCAT TTCGATTATT TTGACGAAGA AGCACGTTCC TTGCTTGCCT TAGGACTTCC AATCCCTGCG TATGACCAGC TTCTGAAGAC GTCTCACGCT TTTAACATTT TAGACGCTAG AGGTTTCATT GGTGTAACTG AACGTGCTCG TTATTTTGGA AGAATGCGCA GCTTGGCTCG CCAATGTGCC CAACTGTGGT TAGCGACACG TGAGTCTCTT GGACATCCTC TTGGTGTTGT CTCCGAACCA GTTCCTCCCG TTTGTCACAG AGCTGCTTTG GAAAAAGTGG CTGAAAAGGT TCCTGAAGAT CCAAGATCGT TTATTATCGA GATAGGGACT GAAGAGATGC CACCTCAAGA TGTTATCAAT GCTAGTGAAC AACTCAGGGT CTTAGTGCTA GAATTACTAG AGGACCAAAG ATTGCGGCAT GGTGCTGTGA AGGCATTTGG CACACCTCGC AGGCTAGTGG TTTTAGTAGA TGCTATGTCT TCTAAGCAGC TGGAAGAGGA GGTTGAAGTT CGAGGACCCC CTGCTTCTAA AGCTTTTGAT GATCAAGGAA ATCCTACAAA GGCTGCAGAT GGTTTTAGTC GTAGATATGG CGTTCCATTG GAAAAATTGT ACAGAAAAGT TTCTGGGAAG ACAGAATATG TCCATGCACG AGTTACAGAG CCAGCTCGAC TTGCTTTGGA GGTTCTGTCA GAAGATTTAC CTGGTATACT GGCTAAAATA TCGTTCCCAA AGTCGATGCG CTGGAACTCT TCAGTAATGT TTAGCAGGCC GATTCGCTGG GTTATGGCCT TACATGGGGA TCTGGTTGTG CCATTCTCCT TTGCTGGCAT CTCAAGTGGA AATGTATCTT GTGGACTTCG CAATACTGCT TCAGCATCAC TATTTGTACA GAATGCAGAA TCCTATGAAG ATGCTATGAG GAATTCTGGA ATCAATATTG AGATTGAGGC ATTTATGGAT CTATGTTGTC ATTTCATTGG TTACCATAAT TTACAGGAAA GGAAGAAAAT CATTCTTGAG AAGTCAAATG CACTAGCTAA GAGTGTGAAT GGGCGCCTTG TTGTCCCGCA GAACTTACTT AATGAGGTTG CAAATCTCGT CGAAGCTCCT GTGCCTTTAA TTGGAAAGTT CAAGGAATCA TTCTTAGAAC TTCCAGAGGA GCTATTAACT ATTGTTATGC AGAAGCACCA GAAGTATTTT TCTATTATTG ATGAGAGTGG ACAGCTATTG CCTTACTTTA TTGCTGTTGC CAATGGTGCA ATAAATGAGG ATGTGGTGAA GAAAGGAAAT GAAGCAGTTC TCAGGGCACG TTATGAAGAT GCGAAGTTCT TCTATGAGGT GGACACAAGG AAAAGGTTTT CTGAATTCCG AGATCAGCTA CAGGGAATTC TTTTCCATGA AAAGCTGGGG ACAATGCTGG ATAAGATGAA CCGCCTAAAA AAGATGGTAT CTAAGCTTTG TTTGGCCCTC GAAATTGATG AAGATCTGCT TCCGGTTGTA GAGGATGCTG CCTCACTTGC TATGTCAGAC CTTGCAACTG CTGTAGTTAC AGAATTTACT GCGCTGTCAG GAATAATGGC TCGTCATTAT GCTCTCAGAG ATGGCTATTC AGAGCAGATA GCTGAAGCTT TGCTGGAAAT TACACTTCCT AGATTTTCTG GAGACGTCAT CCCAAAAACA GATGCAGGAA TGGTTTTGGC AATAGCGGAT AGATTGGATA GCCTTGTTGG TTTATTTGCT GCTGGTTGCC AGCCAAGTTC AACAAATGAC CCTTTTGGCC TTAGAAGAAT ATCATATGGC TTAGTTCAGA TTTTGGTCGA GAAGGATAAA AATGTCAACT TCAAACGTGC TCTAGAACTT GCAGCTAGTG TACAACCGAC CAAGGTTGAG GCAAACACTG TAGAAGATGT GTATCAATTT GTTACACGAA GACTGGAACA ACTACTGGTT GACAACGGAG TAAGCCCTGA AGTAGTTAGG TCTGTCCTAG CAGAGCGTGG AAACAATCCT TGTCTGGCAG CTCGGACTGC ATACAAGATG GAAAAGCTAA GCAAAGGTGA GATATTTCCG AAGATAGTGG AAGCATATTC TCGTCCCACA CGCATTGTCC GAGGGAAAGA CGTTGGTGTT GGAGTTGAGG TGGATGAGAA TGCATTTGAG ACTTCCCAAG AGAGAGCGTT GTGGAGTACT TACACCTCTA TTAAAGATCG AATTCACACT GGCATAGAAA TAGAGGAGTT CACCGAGGTA TCCATGCAAT TGGTGGAGCC ACTCGAGGAT TTCTTCAACA ATGTATTCGT GATGGTGGAG GAAGAAAGAG TGAGGAAGAA CAGACTCGCT CTGCTCAATA ACATTGCCAA TCTTCCCACA GGAGTCATTG ACCTCTCATT TTTGCCTGGA TTTTGAGCTT TTACTTGTTT CATAATCCCA CTCAGGAATC ATCAATTCAT TGACC |
| Length | 3385 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12952195.. 12960295 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G48110.1 |
| Description | glycine-tRNA ligases |
| TAIR curator summary | glycine-tRNA ligase |
| Alias | [EDD][EDD1][EMBRYO-DEFECTIVE-DEVELOPMENT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg487264 | pentatricopeptide (PPR) repeat-containing protein |
| 7.34847 |
Ahg939504 | |
| 14.8661 |
Ahg483405 | Ribosomal protein L3 family protein |
| 21.7256 |
Ahg348313 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 29.3258 |
Ahg924584 | chloroplast signal recognition particle 54 kDa subunit |
| 32.619 |
Ahg326110 | ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases |
| 33.2265 |
Ahg930707 | bacterial hemolysin-related |
| 36.8782 |
Ahg470751 | ribosomal protein L4 |
| 41.4126 |
Ahg496671 | AAA-type ATPase family protein |
| 42.1426 |
Ahg478824 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|