Detail



ID : Ahg939504

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939504|scaffold_600048.1
Sequence
GACTGTGTGT GTGTTCAACA ATGTCGTCCA TGAACTTCAA TCCATTTCAA AACTGGTTCG AGAAACCGCC GAACCCAGTC CCTTCCATCA ATTTCGTCTC GCTCGCTGAT TCATTCTTCC CCAAGTCGCA GTCTCCGAAT TTCGCTGCGA TTGGCCTTCC TAAGTTCTCC AAGAAGCCCC CAAAACCCGA AACAGGAACC GACGAGCCAG GACCGTACAA GCAAATCGCC GAGCAGTTCT TATGGGAGTG TGAGAACATA CCGGATTACA GGCACACTCC AGAAGTGGAT AAGATTCTCA ACGAAGATCC AGTTTTCGAG AAGAAGGAGA ATCCGAGCAC AGACGAGATT GAAGCTGAGC AGAAATGGTG GGAGAGATTT CGAGCGAGTC CTGTGGTTCA GTTTATGACT CGCGCCGAGG AGATTGCGGA CGATATGAAC AAGATGGAGC TCGAGGATAA CGACACGCCT TATCGGAAAG AAGACAAGGA ATACTGGAGA GCCATTCCTC ATGTGCCGGG CTTTGACGGG AGGCCGATGC CTAGGAAGGC GATTAAATCA AAGGAAGAGA GTGATGATAA GTTTTGGGAT TTCATGAAAC AGTTCCTCTT CGGGCTCTGG GGTTTCCGGC AACGTCCTTA CCCGCCGGGT CGACCCATAG ACGTGGCTCA GGCTATTGGT TACAAACGGC TTGAGAAGCG CTATTATGAC TTCATAATGA AGACCGGTGG TTGGTGGTAT AAAGACCGAC TTGGCCGTTC TAGAGGCCCT TGTGAGCTTA TAACCCTTAA GACGGCTTAT GGAGCTGGAA TAATTGACAG AGATACTTTC ATTTGGGGCG AGGACATGGA TGAATGGGCG CCTATTCACA TGGTTTACGG TTTGGAACCT GCAATTGCCA CTTGGGAAGT GAGGCTTGGT GCAGCGGCAA CGGCTTTCCT TCACAAACTC CAGAAGGGAA TACCACCATG GGTTCCTCTA AAGGGACGAG AGCCAAAAAC ATACAAGCAG CTCCAAAAAG AAGCTATTGA GAGTAAGAAA CGCGACATGG CAGTGCTCGA AGCAAATGAT GGCGTTTGGC CTGGAGTCAG AACTCCCAGC CACGCTCTGT TTCTCTGGGC GAGTGGGTCT GAATTAACAA CTGTACTGGA ATCTGATCAC ATGCCGAACA AGTTCATCCC CAAACAACTA CGACAAGAGC TGGCCAAAGT AATACCAGGG TTAAGGCCAT GGGAAGTGAT AAGTATAGAG CAAGCTATGG ATCAGATCAG CTATGGTGGA GAGTGGTACC GTGAGCCGCT TGGTACCTAC ACCACTGGTC CTCCTTACAT CAGAGAGTGG AATAGGAGTG TCATGAGGCT ATTCCGGATT TTCTACAACC TCAGTGTTCG AGTAGGCCAG AAGCTGGAGA GGACAGTCCC GGGGTTTGAC ACTATAATGG AAAAAGTTCA GAAAGATTAC GACACTCGGA TTGCTCGAAG GATGAAGCGG AGAGAGGAGG AGCTGAGAAA AGAGGACCTG AAGCATTATT CCGGCCGTAG CGATGAAGAT GAGGAGGAGA AGGACGATGA TAGCAACTCC AAATGATTGA AGTTGAAGCA AAGTCT 
Length1606
Protein Sequence
Protein Residue
Map Locationscaffold_6: 182399.. 184659
Download Sequence
A.thaliana
AGI-codeAT5G01590.1
Description
TAIR curator summary
Alias[TIC56][TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 56]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg903252 FtsH extracellular protease family
5.09902 Ahg945288 pfkB-like carbohydrate kinase family protein
6.63325 Ahg339208 Aldolase superfamily protein
7.34847 Ahg485172 glycine-tRNA ligases
10.583 Ahg496515 nucleoside diphosphate kinase 2
15.6844 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
17.4642 Ahg472316 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
17.4929 Ahg944415 Pentatricopeptide repeat (PPR) superfamily protein
18.868 Ahg483511
18.9209 Ahg486341 haloacid dehalogenase (HAD) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression