Detail


ID : Ahg485214

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485214|fgenesh2_kg.5__1206__AT3G48560.1
Sequence
ATGGCGGCGG CAACATCTTC TTCGATCTCC TTCCCCACCA AACCTTCCTC CTCCAAATCT CCATTACCAA TCTCCAGATT CTCCCTCCCA TTCGCACTAA ACCCCAACAA ATCATCCTCC TCCTCTTCCT CCCGCCGCCG CGGTATCAAA TCCAGCTCTC TCTCCATCTC CGCCGTGCTC AACACAACCA CCAATGTCAC AACCACTCCC TCTCCAACAA AACCTACCAA ACCCGAAAAA TTCATCTCCC GATTCGCTCC AGATCAACCA CGCAAAGGCG CTGATATCCT CGTCGAAGCT TTAGAACGTC AAGGCGTAGA AACCGTCTTC GCTTACCCTG GAGGTGCATC AATGGAGATT CACCAAGCCC TAACTCGCTC CTCGTCAATC CGTAACGTCC TTCCTCGTCA CGAACAAGGA GGTGTTTTCG CCGCCGAAGG ATACGCTCGA TCCTCAGGTA AACCAGGTAT CTGTATAGCC ACTTCAGGTC CCGGAGCTAC GAATCTCGTT AGCGGATTAG CCGATGCGTT GTTAGATAGT GTTCCTCTTG TAGCAATCAC AGGTCAAGTC CCTCGTAGGA TGATTGGTAC TGATGCGTTT CAAGAAACTC CAATTGTTGA GGTAACGCGT TCGATTACGA AGCATAACTA TCTTGTGATG GATGTTGAAG ATATTCCTAG GATTGTTGAG GAAGCTTTCT TTTTAGCTAC TTCTGGTAGA CCTGGACCTG TTTTGGTTGA TGTTCCTAAA GATATTCAAC AACAGCTTGC GATTCCTAAT TGGGATCAGG CTATGAGGTT ACCTGGTTAT ATGTCTAGGA TGCCTAAACC TCCGGAAGAT TCTCATTTGG AGCAGATTGT TAGGTTGATT TCGGAGTCTA AGAAGCCTGT GTTGTATGTT GGTGGTGGTT GTTTGAATTC GAGCGATGAA TTGGGTAGGT TTGTTGAACT TACGGGGATC CCTGTTGCGA GTACGTTGAT GGGGTTGGGG TCTTATCCTT GTGATGATGA GTTGTCCTTG CATATGCTTG GAATGCATGG GACGGTGTAT GCGAATTACG CTGTGGAGCA TAGTGATTTG TTGTTGGCTT TTGGGGTGCG GTTTGATGAT CGTGTCACGG GTAAACTTGA GGCTTTTGCT AGTAGGGCTA AGATTGTTCA TATTGATATT GACTCGGCTG AGATTGGGAA GAATAAGACT CCTCATGTGT CTGTGTGTGG AGATGTTAAG CTGGCTTTGC AAGGGATGAA CAAGGTTCTT GAGAACCGAG CAGAGGAACG TAAGCTTGAT TTTGGAGTTT GGAGGAATGA GTTGAACGTA CAGAAGCAAA AGTTTCCGTT GAGCTTCAAG ACGTTTGGGG AAGCAATTCC TCCACAGTAT GCGATTCAGC TCCTTGATGA GCTGACTGAT GGAAAAGCTA TTATAAGCAC CGGTGTCGGG CAACATCAAA TGTGGGCGGC GCAGTTTTAC AAGTACAAGA AACCAAGGCA GTGGCTATCA TCAGGAGGCC TTGGAGCTAT GGGTTTTGGA CTTCCTGCTG CGATTGGAGC GTCCGTCGCC AACCCTGATG CGATTGTTGT GGATATTGAC GGAGATGGAA GCTTCATAAT GAATGTGCAA GAGCTGGCCA CAATCCGTGT AGAGCAACTT CCAGTGAAGA TACTTTTATT AAACAACCAG CATCTTGGCA TGGTTATGCA ATGGGAAGAT CGGTTCTACA AAGCTAACCG AGCTCACACA TATCTCGGGG ACCCGGCACA GGAGGACGAG ATATTCCCGA ACATGCTGCA GTTTGCATCA GCTTGCGGGA TTCCAGCGGC GAGGGTGACA AAGAAAGCAG ATCTCCGAGA AGCTATTCAG ACAATGCTGG ATACACCAGG GCCTTACTTG TTGGATGTCA TTTGTCCGCA CCAAGAACAT GTGTTGCCGA TGATCCCGAG TGGTGGCACT TTCAACGATG TCATAACGGA AGGAGATGGC CGGACTAAAT ACTGAGAGAT GAAACCGGTG ATTATCAGAA CCTTTCATGG TATTGTATGC ATATGGTAAA AACTTAGTTT GCAATTTCCA GTTTGTTTTG GTAATTTGAG TTTCTTAGTT GTTGAACTGC TTTTTGGTTT ACCTCAGACT CTACTACTGC TGTTGTTGTT TGGTTTCCTA TATATAAATA ATCCGGTTCG GTTTAC
Length2186
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13208281.. 13210472
Download Sequence
A.thaliana
AGI-codeAT3G48560.1
Descriptionchlorsulfuron/imidazolinone resistant 1
TAIR curator summaryCatalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.
Alias[AHAS][ALS][CSR1][IMR1][TZP5][ACETOHYDROXY ACID SYNTHASE][ACETOLACTATE SYNTHASE][chlorsulfuron/imidazolinone resistant 1][IMIDAZOLE RESISTANT 1][TRIAZOLOPYRIMIDINE RESISTANT 5]
Gene coexpression
MR
MR Locus Description
7.54983 Ahg473673 alpha/beta-Hydrolases superfamily protein
7.87401 Ahg928746 haemoglobin 2
9.79796 Ahg927565 sulfite oxidase
10.6771 Ahg946135 RAB GTPase homolog E1B
12.2474 Ahg492575 PGR5-LIKE A
16.1245 Ahg483917 CP12 domain-containing protein 1
17.0294 Ahg915044 isopropyl malate isomerase large subunit 1
18.3303 Ahg931277 poly(A) binding protein 2
18.4932 Ahg475922 hydroxypyruvate reductase
19.1311 Ahg480305 alanine:glyoxylate aminotransferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression