Detail



ID : Ahg946135

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946135|scaffold_702364.1
Sequence
GCTCTCCAAA TCCGTCTTCC ATGGCGATTT CGGCTCCAGC CGCTTGTTCT TCTTCCTCTA GACTTCTCTG TTCCTACTCC TCTCCTTCTC CTTCTCTCTG TCCCGCCATT TCCACCTCTG GTAAGCTCAA AACCCTAACT CTCTCTTCCT CCTTCCTCCC TTCTTACTCA TTAACCACTA CCTCCGCTTC TCAATCCACT CGTCGCTCCT TCACCGTCCG CGCCGCTCGT GGAAAGTTCG AGAGGAAGAA GCCTCATGTC AACATCGGAA CCATCGGTCA TGTTGACCAT GGTAAGACTA CTTTAACCGC AGCTCTCACC ATGGCTCTTG CTTCAATTGG TTCCAGCGTC GCCAAAAAGT ACGACGAGAT TGACGCTGCG CCGGAGGAGA GAGCTCGTGG TATCACAATC AACACTGCTA CTGTGGAGTA CGAGACTGAG AATCGTCACT ACGCTCACGT TGATTGTCCT GGTCACGCTG ATTACGTTAA GAACATGATT ACCGGAGCTG CACAGATGGA CGGAGCTATC CTCGTTGTTT CCGGCGCCGA CGGTCCTATG CCTCAGACTA AAGAGCATAT CCTTTTGGCG AAGCAGGTTG GTGTTCCTGA TATGGTTGTG TTTCTTAACA AAGAGGATCA AGTAGATGAT GCAGAGTTGT TAGAGCTCGT TGAGCTTGAG GTTCGTGAGC TTCTCTCGTC GTATGAATTT AACGGTGATG ATATTCCGAT TATCTCTGGT TCTGCTCTTT TAGCTGTGGA GACTCTCACT GAGAATCCTA ATGTGAAGAG AGGTGATAAC AAATGGGTAG ATAAGATTTA TGAACTTATG GATGCTGTTG ATAGTTACAT CCCAATCCCT CAGAGACAAA CTGAATTGCC ATTCTTGTTA GCTGTTGAGG ATGTGTTCTC TATCACGGGA CGTGGTACTG TGGCTACAGG GCGTGTCGAG AGAGGTACGG TTAAGGTAGG AGAGACTGTA GATTTAGTTG GTTTAAGGGA AACTAGGAGC TACACAGTCA CTGGGGTTGA AATGTTTCAG AAGATTCTCG ATGAGGCTTT AGCTGGTGAC AATGTAGGGT TGTTGCTTAG GGGTATTCAA AAGGCTGATA TTCAGAGAGG TATGGTTTTA GCTAAGCCGG GATCGATTAC TCCACATACC AAGTTTGAAG CAATTGTGTA TGTGTTGAAG AAAGAAGAAG GTGGAAGGCA TTCTCCATTC TTTGCAGGTT ACAGGCCTCA GTTCTACATG AGGACGACTG ATGTTACAGG TAAAGTGACA AAGATCATGA ACGACAAAGA CGAAGAGTCG AAGATGGTTA TGCCTGGTGA TCGAGTGAAG ATAGTTGTTG AGCTTATTGT GCCGGTGGCT TGTGAACAAG GGATGAGGTT TGCTATCAGA GAAGGAGGAA AGACTGTTGG TGCTGGAGTT ATTCAGGCTA TCATCGAATA AGGTTTTAGA GAGTTTCATA TAGTG 
Length1475
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9035522.. 9036996
Download Sequence
A.thaliana
AGI-codeAT4G20360.1
DescriptionRAB GTPase homolog E1B
TAIR curator summary
Alias[ATRAB8D][ATRABE1B][RABE1b][RAB GTPase homolog E1B]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg938526 sedoheptulose-bisphosphatase
5.38516 Ahg489169 photosystem II stability/assembly factor, chloroplast (HCF136)
5.65685 Ahg471025 chloroplast RNA binding
8 Ahg486548 Transketolase
8.12404 Ahg471925 Translation initiation factor 2, small GTP-binding protein
8.94427 Ahg311903 ALBINA 1
9.32738 Ahg473747 glyceraldehyde-3-phosphate dehydrogenase B subunit
9.48683 Ahg485801 high cyclic electron flow 1
9.8995 Ahg933344 63 kDa inner membrane family protein
10.0995 Ahg482714 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression