Detail



ID : Ahg485223

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485223|fgenesh2_kg.5__1215__AT3G48680.1
Sequence
CTCCCGACGA CTCCTCTGTG TCTCCTCCTC CGGGAAGCTC TCTCTATCTC TCTCGACAAA TCCTTGAAGA ATCCGATTCC ATAGCAATGG CGACTTCGCT AGCTCGAATC TATAAAAGAA GCGTGACAAC GGCAGTGACT TCGAATCTGA TTCGGCGTTA CTTCGCCGCC GAAGCAGTTG CGGTGGCGAC GACGGAAACA CCTAAACCGA AATCGCAAAT CACGCCGTCG CCGGATCGGG TTAAGTGGGA CTACAGAGGC CAAAGACAGA TCATTCCTCT GGGACAGTGG CTACCGAAGG TAGCTGTAGA TGCCTACGTG GCACCTAACG TTGTGTTGGC TGGTCAGGTC ACCGTCTGGG ACGGCTCCTC TGTATGGAAC GGGGCCGTTT TGAGAGGAGA TCTTAACAAG ATCACTGTTG GATTCTGCTC AAATGTCCAG GAACGGTGTG TTGTTCATGC TGCGTGGTCG TCCCCAACAG GATTGCCAGC ACAGACATTG ATCGATAGGT ACGTGACAGT TGGTGCATAC AGTCTTTTAA GATCATGCAC TATCGAACCC GAATGCATCA TCGGGCAACA CTCAATCCTA ATGGAAGGTT CACTGGTCGA GACCCGCTCA ATCTTGGAAG CTGGTTCTGT TTTGCCACCT GGCAGAAGAA TCCCATCTGG TGAACTCTGG GGAGGCAATC CAGCAAGGTT TATTCGAACA CTCACCAATG AAGAAACCTT AGAGATCCCA AAACTCGCTG TTGCCATTAA CCACCTAAGT GGAGATTACT TCTCAGAGTT CTTACCTTAC TCAACTATCT ATCTAGAGGT TGAGAAGTTC AAGAAATCCC TTGGAATCGC CGTCTAGAAA GCTTTCCTTT TCCAGGTTTC TGGCTACTTC CTTCACTTAG AAAGCTTCTT CGTTTTTTTG GAATTTGATC TGAATAAGTA GCTGGAGAAC AACAGCAAAA GCAGAGCTGT GTTTCAAATG TTGTCTTCTC TGTTTGTTTT GTTTAAATTC ATATCCTTGT GTTCAAACTT TCTATGAAGA TGATAATGGT GAAAACTGAA AAGTGAAAAA CTTCTTTTGT GTCCTCTAAC AATTGGAAAA GTTAATAAT 
Length1109
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13232166.. 13234192
Download Sequence
A.thaliana
AGI-codeAT3G48680.1
Descriptiongamma carbonic anhydrase-like 2
TAIR curator summaryEncodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.
Alias[AtCAL2][GAMMA CAL2][gamma carbonic anhydrase-like 2]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg476319 histidinol phosphate aminotransferase 1
9.74679 Ahg476809 ARID/BRIGHT DNA-binding domain-containing protein
10.247 Ahg480100 anaphase-promoting complex/cyclosome 2
11.8322 Ahg483043 Clathrin light chain protein
18.5203 Ahg492791 Cytidine/deoxycytidylate deaminase family protein
22.1811 Ahg929889 pre-mRNA-processing protein 40C
22.6495 Ahg909381 tubulin-tyrosine ligases;tubulin-tyrosine ligases
22.8692 Ahg478516 lysyl-tRNA synthetase 1
26.1151 Ahg477980 aldehyde dehydrogenase 22A1
26.3249 Ahg491408 homeobox gene 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression