| Annotation |
|---|
| Description | jgi|Araly1|485240|fgenesh2_kg.5__1232__AT3G48870.1 |
| Sequence |
TCTTCTTCAC TTTCCTATCT CTATCCCATT AAAAGGAGTC TCTCGCTTTC TCGAACTTCT CTATCCAAAG GCGTCGACGC AGCCTCCAAC ACATCATGGC TTGGTGTGTA GCTGTTTTGA AAGCTCCTTT ATTTGGTCCC GGAAGGCATG TGCAAGCCGA AGAATACAGA AAACCAAGAG GGTGTGTGAA GATGATGTGC AGTTTACAAG CACCTGGTCT GAGAATTCAG GCCAAAGAAT ACAGAAAACC AAGAGGGTGT GTGAAGATGA TGTGCAGTTT ACAAGCACCT GTTCTGAAAA TTCAGAGCTT CTCAGGGTTA AGGGCCCCCA ATGCATTAGA TTATATGGCA AGGCCTTGTC CAGGTTTCCT TGTTAAGTTT AAACTTGCAA TATCATCTCG GAGAGAAAAA GCTAGCCGAT TTGTACCCAA AGCAATGTTT GAGCGTTTTA CCGAGAAAGC AATTAAGGTC ATAATGCTGT CTCAAGAGGA AGCTCGTAGA CTTGGCCATA ACTTTGTTGG GACTGAGCAA ATACTGTTGG GTCTAATTGG AGAAGGGACT GGGATTGCCG CCAAGGTTCT TAAATCCATG GGGATCAATC TTAAAGATTC ACGCGTGGAA GTGGAAAAGA TAATTGGGAG AGGCAGTGGA TTTGTGGCAG TGGAGATTCC ATTTACTCCT CGCGCAAAGC GGGTGCTGGA GTTGTCACTA GAGGAAGCTC GACAACTTGG GCATAACTAC ATTGGTTCAG AGCACCTTTT GCTTGGTCTA CTTCGTGAAG GGGAGGGTGT GGCAGCTCGT GTCTTGGAGA ATTTGGGTGC AGATCCTAGT AATATCCGGA CACAGGTTAT ACGTATGGTC GGGGAAAACA ATGAAGTCAC AGCAAGCGTT GGTGGGGGAA GCAGCGGAAA CAGCAAAATG CCAACACTAG AAGAGTATGG GACTAACTTA ACTAAACTAG CAGAGGAGGG TAAACTGGAT CCGGTTGTTG GAAGGCAGCC ACAGATCGAA CGAGTGGTCC AGATCTTGGC TCGAAGAACC AAGAACAACC CGTGTCTTAT TGGAGAACCT GGAGTTGGTA AGACAGCAAT AGCGGAAGGT CTTGCACAGC GAATTGCTAG TGGTGATGTT CCTGAAACAA TTGAGGGGAA GACGGTTATA ACCCTTGATA TGGGTCTTCT AGTGGCTGGA ACGAAATACC GTGGAGAATT CGAGGAAAGA TTGAAGAAGC TTATGGAGGA AATCAGGCAA AGTGATGAGA TAATTCTATT TATTGATGAA GTGCACACGC TCATCGGTGC AGGAGCCGCT GAAGGTGCGA TCGATGCTGC TAACATCTTA AAGCCAGCTC TAGCAAGAGG TGAATTGCAG TGTATTGGTG CAACAACATC GGATGAGTAC AGGAAGCACA TTGAGAAAGA TCCTGCATTG GAGAGACGTT TCCAGCCTGT GAAGGTACCT GAACCAACTG TAGAAGAAGC TATACAGATC TTGCACGGTC TGCGTGAGCG CTATGAGATC CACCACAAAC TTCGGTACAC TGATGAAGCC TTGGTTGCTG CTGCACAATT GTCACATCAG TACATCAGTG ATCGGTTTCT TCCCGACAAA GCGATTGACT TGATTGATGA AGCTGGGTCT CGGGTTCGAC TACGCCATGC TCAGGTACCT GAGGAAGCTA GAGAGCTTGA AAAGCAACTC AGGCAAATCA CCAAAGAGAA GAATGAAGCT GTGCGAGGCC AAGACTTTGA GATGGCTGGT TCTCATCGTG ACCGTGAAAT AGAGCTCAGG GCTGAGATAG CTAATGTTTT AGCTTTAGGC AAAGAAGTGG CCAAAGCCGA GAATGAAGCT GAGGAAGGAG GACCTACTGT CACAGAATCC GACATCCAAC ACATTGTTGC CACCTGGACA GGAATCCCAG TAGAGAAAGT CTCGTCTGAT GAATCTAGCC GTCTTCTCCA AATGGAGCAG ACCCTTCACA CAAGAGTCAT TGGCCAAGAT GAAGCCGTTA AAGCAATCAG CCGGGCTATC CGCCGTGCCC GTGTTGGACT CAAGAACCCA AACCGTCCTA TCGCCAGTTT CATCTTCTCT GGTCCAACTG GTGTTGGGAA ATCAGAGCTT GCTAAGGCCT TGGCTGCTTA CTACTTTGGT TCAGAAGAAG CAATGATACG TCTTGACATG AGTGAGTTCA TGGAACGGCA CACTGTTTCA AAACTCATTG GTTCACCTCC TGGTTACGTA GGATACACAG AAGGCGGTCA GTTAACTGAG GCGGTTCGAC GCAGGCCCTA CACACTTGTT CTCTTTGACG AAATTGAGAA AGCACATCCT GATGTTTTCA ACATGATGCT TCAGATCCTA GAAGACGGTA GACTAACTGA TAGCAAAGGA AGAACTGTCG ATTTCAAGAA CACGCTTCTT ATCATGACTT CAAATGTAGG AAGCAGCGTG ATCGAAAAAG GTGGTAGAAG AATCGGGTTT GATCTTGACC ATGACGAGAA AGACAGCAGT TACAACAGAA TCAAGAGCTT AGTGACTGAG GAACTAAAAC AATATTTCAG ACCGGAGTTC TTGAACAGGT TAGATGAGAT GATTGTTTTC AGACAGTTGA CAAAGCTGGA AGTCAAAGAG ATTGCTGATA TAATGCTTAA AGAAGTGGTG GCGAGACTTG AGGACAAAGA GATTGAGCTT CAGGTAACTG AGAGGTTTAA AGAACGAGTG GTGGATGAAG GATTCGACCC AAGTTATGGC GCGAGGCCGC TTAGACGTGC AATTATGAGG CTTTTGGAGG ATAGTATGGC GGAGAAGATG CTTTCAAGGG ACATTAAAGA AGGAGATTCT GTGATTGTTG ATGTTGATGC GGAAGGAAGT GTGGTTGTGT TGAGTGGTAA CAACAGTGGA CGTGCTGGTG GTTTTGCTGC TGAAGAAGCC ATGGAAGATC CAATTCCAAT ATTGTAGAAG GAAACAAGGG TTTTTCTAGA GATTATTTTT TCAAGTGTTA TTGAATTGAC TATTGAGTCT CTTTCGATTC GTATTTTGTA CTTTAATCTC TTTGTTTCTG GATATTGATT GTTTGGGAAT CATAGAGAAT TTCCCACACA AAAAAA |
| Length | 3106 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 13347018.. 13351374 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G48870.1 |
| Description | Clp ATPase |
| TAIR curator summary | Encodes a nuclear encoded protein with similarity to Clpa regulatory subunit of CLP protease complex. The protein is localized to the chloroplast stroma. May function redundantly with TIC complex in chloroplast protein import. |
| Alias | [ATCLPC][ATHSP93-III][ClpC2][HSP93-III][ClpC2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.3923 |
Ahg476152 | NHL domain-containing protein |
| 10.4881 |
Ahg930508 | dehydratase family |
| 14.2829 |
Ahg471076 | Eukaryotic aspartyl protease family protein |
| 15.2315 |
Ahg341756 | tRNAse Z4 |
| 17.4642 |
Ahg940289 | hydroxymethylbilane synthase |
| 17.5499 |
Ahg931036 | adenylate cyclases |
| 17.6635 |
Ahg943148 | Cupredoxin superfamily protein |
| 17.8885 |
Ahg487993 | catalytics |
| 19.3907 |
Ahg482044 | Cysteinyl-tRNA synthetase, class Ia family protein |
| 19.5959 |
Ahg473597 | 2-oxoacid dehydrogenases acyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|