Detail



ID : Ahg487993

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487993|fgenesh2_kg.6__1127__AT5G11560.1
Sequence
ACTCTCTTTC ATCTCCAGAT CTGCTGCTGA TAATAAATTA GTAAGCAATC GTCATAGCTA TGGCGATTAG GGTTTTTCTT ACCCTTCTCC TCTTCTTATC ATCTGCAATT GTATCGTTTT CTCTCTATGA AGATCAAGCC GGCCTCACTG ATTGGCACCA AAGGTACATT GGGAAAGTGA AGCATGCAGT ATTCCACACT CAAAAGACTG GAAGAAAGCG TGTTATCCTC TCAACCGAGG AGAATGTTGT TGCTTCACTT GATCTCAGAC ATGGGGAGAT TTTTTGGCGA CATGTTCTCG GGACAAAGGA CGCTATCGAT GGGGTTGGTA TTGCCTTGGG AAAATATGTT ATCACCCTTT CATCAGAAGG AAGTGCTTTA AGAGCCTGGA ACCTTCCTGA TGGCCAAATG GTGTGGGAAA CATCTCTGCA TACCGCACAA CATTCAAAGT CACTGTTATC AGTGCCGATA AATTTGAAGG TTGACAAGGA CTACCCTATT ATTGTCTTCG GTGGTGGGTA CCTTCATGCT GTTTCTGCTA TAGATGGTGA GGTCCTCTGG AAAAAGGATT TCACAGCGGA AGGGTTTGAA GTTCAGCGGG TTCTTCAACC TCCTGGAAGT AGTATAATAT ATGTTCTGGG ATTCATTAAT TCATCTGAGG CTGTTGTTTA TCAGATTGAT TCCAAAAGTG GAGAGGTAGT GGCACAAAAA AGTATGGTGT TCCCTGGTGG ATTCTCTGGC GAAATTTCAT CAGTTTCAAG TGACAAAGTT GTTGTTCTTG ATTCGACGAG GTCAATTTTG GTTACTATTG GCTTCATAGA TGGGGGTATT AGCTTCCAGA AGACCCCTAT TTCAGATCTT GTTGAGGATT CCGGGAAGGC TGAGATTTTA TCAGCGCTTC TTAGCAATAT GCTTGCTGTA AAAGTCAATA AACGCACTCT ATTTGTGAAG GTTGGTGGCG AAGGAAAGTT GGAGGTGGTA GACTCTTTGT CTGATGAAAC AGCCATGAGT GATTCACTTC CAGTTGCAGA CGATCAGGAG GCCTTTGCTT CAGTTCACCA TGAAGGGAGC AAGATTCACC TCATGGTGAA ACTTGTGAAT GAATTGGATA ATGTATTGCT TAGAGAGACC ATTCAGATGG ACCAACATAG GGGGCGTGTC CATAAAGTTT TCATGAACAA CTATATCAGG ACAGACAGGA GTAATGGATT TAGGGCGCTT ATTGTGATGG AAGATCACTC ACTCTTGTTA CTGCAACAAG GAGCGATTGT TTGGAGCAGG GAAGAAGGCT TGGCTTCAGT GACTGATGTT ACAACGGCAG AACTCCCTCT AGGAAAAGAT GGTGTATCAG TGGCAAAAGT GGAGCACACT CTCTTTGAGT GGCTTAAGGG CCATGTGCTA AAGCTTAAGG GATCCTTGTT GCTAGCAAGC CCAGAGGACG TGGTAGCAAT TCAAGAATTG AGGGTGAAGA GTTCTGGGAA GAACAAATTG ACCCGTGACC ATAATGGCTT TCGGAAATTA ATCTTAGCAC TTACTCGACC TGGAAAACTT TTTGCTCTGC ACACTGGAGA TGGGAGGATT GTCTGGTCTA TGCTACTAAA ATCTCCTAGC AAATCACAAG CCTGTGAACG TCCAAACGGT ATTAGCTTGT ACCAATGGCA GGTCCCTCAT CATCACGCCA TGGACAAAAA TCCTTCGGTG CTTGTAGTTG GCAAGTGCGG ATCAGATTCA AGTGCGCCCG GTGTACTTTC ATTTGTAGAT GTGTACACGG GAAAGGAGAT TAGCTCATCA GATATTGGTC ACTCTGTTGT GCAAGTTATG CCTCTTCCAT TTACCGACTC GACGGAACAA CGTTTACATC TAATAGCTGA TACAGTTGGC CACGTCCACT TGTATCCGAA AACTTCAGAG GCTCTCAGCA TCTTTCAACG TGAGTTTCAA AATGTATATT GGTACACTGT TGAGGCAGAT GATGGAATTA TCAGAGGACA CGTAATGAAG GGCAGTTGCT CTGGTGAGAC TGCAGATGAG TACTGCTTTA CAACCAGAGA ACTTTGGACT GTTGTGTTTC CTTCGGAATC AGAGAAAATC ATTTCAACAC TAACACGAAA ACCTAATGAG GTTGTTCATA CACAAGCCAA AGTCAACACA GACCAAGACC TGTTGTATAA ATATGTATCA AGAAACTTAC TGTTTGTGGC CACCGTTTCA CCAAAAGGTG CTGGTGAGAT TGGCTCAGTT ACACCAGAGG AGTCATCACT TGTAGTATAC CTCATTGACA CCATCACTGG ACGGATACTG CACCGTTTGT CACATCAAGG CTGTCAAGGG CCGGTTCATG CGGTGTTTAG TGAAAATTGG GTTGTTTACC ACTACTTCAA TCTTCGAGCT CACAAGTACG AGGTTACGGT GGTTGAGATC TATGATCAGT CTAGGGCGGA GAACAAAAAT GTCTGGAAAC TCATTCTGGG AAAGCACAAT CTAACAGCAC CTATCACTTC GTACTCTAGG CCAGAGGTGT TTACAAAGTC ACAGTCATAC TTCTTTGCTC AGTCTGTGAA AACCATTGCG GTGACATCCA CAGCAAAGGG TATAACTTCA AAGCAGCTTC TCATTGGTAC CATCGGGGAT CAGATATTGG CACTTGATAA ACGATTTGTG GATCCACGCC GAACACTTAA CCCGTCTCAA GCTGAAAAAG AAGAAGGAAT CATCCCTCTC ACGGATACAT TACCCATCAT TCCTCAGGCG TACGTCACAC ACTCCCACAA AGTAGAAGGT CTAAGAGGCA TAGTAACAGC TCCGTCCAAG CTAGAGTCAA CAACACACGT CTTTGCCTAT GGAGTGGATC TCTTCTACAC AAGACTTGCT CCTTCAAAGA CCTACGACTC ACTGACCGAC GATTTCAGCT ACGCACTTCT CCTGATCACG ATTGTAGCAC TTGTTGCAGC CATCTACATC ACCTGGGTCC TTTCAGAGAA GAAAGAACTA AGCGAAAAAT GGAGGTGATT GAAACCTTAA AAGGTTTAAA ACCCTTCCTC TCTTTGGGCT TTTTTTCACA GTTGTAGAAT GTTTATGAAC CATTTTTCGC ACTCTTAGAA AAAAAACCAT TGGCTTAGCT AAATTCTTGA TGTTAGGCTT TGGAAATTGA GTACACTTTA CAGACTCTTG CTTTGTGACC TTTGTCACAT TCTAAAGTTG GGCTGAACCT TCTGAATTTA AAGTTTATAC AAGCCTCTTT TTAACCTTTT CTTTTTT 
Length3257
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4473971.. 4478733
Download Sequence
A.thaliana
AGI-codeAT5G11560.1
Descriptioncatalytics
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg941202 exportin 1A
6.245 Ahg920619 ubiquitin-specific protease 15
8.94427 Ahg941120 sister chromatid cohesion 1 protein 4
9.21954 Ahg935928 Endomembrane protein 70 protein family
9.48683 Ahg477212 tetratricopeptide repeat (TPR)-containing protein
10.583 Ahg329795 G2484-1 protein
11.5326 Ahg888739 P-type ATP-ase 1
17.6635 Ahg919631 copper/zinc superoxide dismutase 1
17.8885 Ahg485240 Clp ATPase
18.1659 Ahg477830 acyl-CoA binding protein 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression